Sequence Similarity Clusters for the Entities in PDB 4HXD

Entity #1 | Chains: A,C
Polyubiquitin-C protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 143 249 5
95 % 173 301 8
90 % 181 314 6
70 % 194 336 8
50 % 201 356 13
40 % 213 378 17
30 % 434 858 9
Entity #2 | Chains: B,D
RNA-directed RNA polymerase L protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38249
95 % 1 1 28970
90 % 1 1 27775
70 % 1 1 24951
50 % 8 8 4047
40 % 8 8 3859
30 % 8 8 3559

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.