Sequence Similarity Clusters for the Entities in PDB 4HXD

Entity #1 | Chains: A,C
Polyubiquitin-C protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 142 244 5
95 % 172 296 8
90 % 180 309 8
70 % 193 331 8
50 % 200 351 13
40 % 212 373 16
30 % 431 851 9
Entity #2 | Chains: B,D
RNA-directed RNA polymerase L protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37939
95 % 1 1 28732
90 % 1 1 27552
70 % 1 1 24748
50 % 8 8 4012
40 % 8 8 3825
30 % 8 8 3533

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.