Sequence Similarity Clusters for the Entities in PDB 4HXD

Entity #1 | Chains: A,C
Polyubiquitin-C protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 195 311 6
95 % 241 380 5
90 % 259 407 6
70 % 273 427 8
50 % 280 448 12
40 % 293 472 16
30 % 564 1019 9
Entity #2 | Chains: B,D
RNA-directed RNA polymerase L protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42291
95 % 1 1 32017
90 % 1 1 30631
70 % 1 1 27390
50 % 11 11 3191
40 % 11 11 3110
30 % 11 11 2921

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.