Sequence Similarity Clusters for the Entities in PDB 4HXD

Entity #1 | Chains: A,C
Polyubiquitin-C protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 139 241 5
95 % 169 293 9
90 % 177 306 10
70 % 190 328 8
50 % 197 348 13
40 % 209 369 16
30 % 426 845 10
Entity #2 | Chains: B,D
RNA-directed RNA polymerase L protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37675
95 % 1 1 28551
90 % 1 1 27370
70 % 1 1 24574
50 % 8 8 3982
40 % 8 8 3804
30 % 8 8 3508

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.