Sequence Similarity Clusters for the Entities in PDB 4HXD

Entity #1 | Chains: A,C
Polyubiquitin-C protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 130 225 6
95 % 159 272 10
90 % 167 285 11
70 % 176 300 16
50 % 183 320 15
40 % 195 341 18
30 % 408 807 10
Entity #2 | Chains: B,D
RNA-directed RNA polymerase L protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36404
95 % 1 1 27627
90 % 1 1 26500
70 % 1 1 23799
50 % 8 8 3846
40 % 8 8 3669
30 % 8 8 3388

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.