Sequence Similarity Clusters for the Entities in PDB 4HWE

Entity #1 | Chains: H
Fab heavy chain protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46296
95 % 1 2 38518 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 22 36 1160
70 % 982 2511 2
50 % 2033 5180 1
40 % 2344 5834 1
30 % 2862 7269 1
Entity #2 | Chains: L
Fab light chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40992
95 % 32 92 235 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 1.8
PDBFlex
90 % 305 780 2
70 % 991 2553 1
50 % 2034 5180 1
40 % 2345 5834 1
30 % 2863 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4HWE 1 H Fab heavy chain heavy chain 9606
2 4HWB 2 H Fab heavy chain 9606