Sequence Similarity Clusters for the Entities in PDB 4HWE

Entity #1 | Chains: H
Fab heavy chain protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46296
95 % 1 2 38518 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 22 36 1160
70 % 982 2511 2
50 % 2033 5180 1
40 % 2344 5834 1
30 % 2862 7269 1
Entity #2 | Chains: L
Fab light chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40992
95 % 32 92 235 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 1.8
PDBFlex
90 % 305 780 2
70 % 991 2553 1
50 % 2034 5180 1
40 % 2345 5834 1
30 % 2863 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2VXV 1 H HUMAN IGG ABT-325 9606
2 5WK2 2 H M116 HEAVY CHAIN FD 9606
3 5I1K 2 H FAB HEAVY CHAIN 9606
4 5W05 2 H M59 FAB HEAVY CHAIN FD 10090
5 4HPO 1 H CH58 Fab heavy chain 9606
6 5IT2 1 H heavy chain 9606
7 5IBU 2 G, H 6652 Heavy Chain 9606
8 2XWT 1 A THYROID BLOCKING HUMAN AUTOANTIBODY K1-70 HEAVY CHAIN FAB FRAGMENT HEAVY CHAIN, RESIDUES 1-229 9606
9 5WK3 2 Q, S, U, W M116 HEAVY CHAIN FD 9606
10 3UJJ 2 H Fab region of the heavy chain of anti-HIV-1 V3 monoclonal antibody 4025 9606
11 4M6N 2 H CNTO1959 heavy chain FD 9606
12 5I1L 2 B, H FAB HEAVY CHAIN 9606
13 4M6M 2 H CNTO1959 heavy chain FD 9606
14 5Y11 1 A MAb 4-5 heavy chain 9606
15 4KMT 2 H heavy chain 5-51/CNTO888/IGG1 Fab 9606
16 5ZV3 2 H Heavy chain of antibody CBTAU28.1 9606
17 4RIS 2 H CH58-UA Fab heavy chain 9606
18 4NRX 2 A, D, H m66 Heavy Chain 9606
19 5MVZ 1 A, H Fab 4AB007 H-chain 9606
20 4QXG 1 H Fab, heavy chain, IgG1 Fab, heavy chain 9606
21 4NRZ 1 A, H M66.6 HEAVY CHAIN Fab Heavy Chain 9606
22 4HWE 1 H Fab heavy chain heavy chain 9606
23 4HQQ 1 H CH58 Fab heavy chain 9606
24 5TZ2 1 H C47B222 Fab Heavy Chain 9606
25 5I1J 2 H FAB HEAVY CHAIN 9606
26 4ZD3 1 H 679-14-14E06 Fab fragment heavy chain 9606
27 5IBT 1 H UCA Heavy Chain 9606
28 5W06 3 H M1587 FAB HEAVY CHAIN FD 10090
29 4HWB 2 H Fab heavy chain 9606
30 4RIR 1 A, H CH58-UA Fab heavy chain 9606
31 4NP4 2 H, I bezlotoxumab heavy chain 9606
32 3HMX 4 H USTEKINUMAB FAB HEAVY CHAIN 9606
33 6GK8 1 H HUMAN FAB ANTIBODY FRAGMENT OF CBTAU-28.1(S32R;E35K) 9606
34 3HMW 2 H USTEKINUMAB FAB HEAVY CHAIN 9606
35 4NRY 2 A, H m66 Light Chain 9606
36 5IBL 3 C, H 6639 Heavy Chain 9606