Sequence Similarity Clusters for the Entities in PDB 4HWE

Entity #1 | Chains: H
Fab heavy chain protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 48190
95 % 1 2 40029 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 23 41 1009
70 % 1036 2655 2
50 % 2144 5473 1
40 % 2467 6175 1
30 % 2997 7653 1
Entity #2 | Chains: L
Fab light chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42733
95 % 35 103 220 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 1.8
PDBFlex
90 % 330 844 2
70 % 1044 2696 1
50 % 2145 5473 1
40 % 2468 6175 1
30 % 2998 7653 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2VXV 1 H HUMAN IGG ABT-325 9606
2 5WK2 2 H M116 HEAVY CHAIN FD 9606
3 5I1K 2 H FAB HEAVY CHAIN 9606
4 5W05 2 H M59 FAB HEAVY CHAIN FD 10090
5 4HPO 1 H CH58 Fab heavy chain 9606
6 5IT2 1 H heavy chain 9606
7 5IBU 2 G, H 6652 Heavy Chain 9606
8 2XWT 1 A THYROID BLOCKING HUMAN AUTOANTIBODY K1-70 HEAVY CHAIN FAB FRAGMENT HEAVY CHAIN, RESIDUES 1-229 9606
9 5WK3 2 Q, S, U, W M116 HEAVY CHAIN FD 9606
10 3UJJ 2 H Fab region of the heavy chain of anti-HIV-1 V3 monoclonal antibody 4025 9606
11 4M6N 2 H CNTO1959 heavy chain FD 9606
12 5I1L 2 B, H FAB HEAVY CHAIN 9606
13 4M6M 2 H CNTO1959 heavy chain FD 9606
14 5Y11 1 A MAb 4-5 heavy chain 9606
15 4KMT 2 H heavy chain 5-51/CNTO888/IGG1 Fab 9606
16 5ZV3 2 H Heavy chain of antibody CBTAU28.1 9606
17 4RIS 2 H CH58-UA Fab heavy chain 9606
18 4NRX 2 A, D, H m66 Heavy Chain 9606
19 6FY2 1 H, X CAP228-16H Heavy Chain 9606
20 5MVZ 1 A, H Fab 4AB007 H-chain 9606
21 4QXG 1 H Fab, heavy chain, IgG1 Fab, heavy chain 9606
22 4NRZ 1 A, H M66.6 HEAVY CHAIN Fab Heavy Chain 9606
23 4HWE 1 H Fab heavy chain heavy chain 9606
24 4HQQ 1 H CH58 Fab heavy chain 9606
25 5TZ2 1 H C47B222 Fab Heavy Chain 9606
26 5I1J 2 H FAB HEAVY CHAIN 9606
27 4ZD3 1 H 679-14-14E06 Fab fragment heavy chain 9606
28 5IBT 1 H UCA Heavy Chain 9606
29 5W06 3 H M1587 FAB HEAVY CHAIN FD 10090
30 4HWB 2 H Fab heavy chain 9606
31 6FY0 1 H, I CAP228-16H Heavy Chain 9606
32 4RIR 1 A, H CH58-UA Fab heavy chain 9606
33 6FY3 1 H, X CAP228-3D Heavy Chain 9606
34 4NP4 2 H, I bezlotoxumab heavy chain 9606
35 6MI2 1 A, D Utomilumab Fab heavy chain 9606
36 3HMX 4 H USTEKINUMAB FAB HEAVY CHAIN 9606
37 6GK8 1 H HUMAN FAB ANTIBODY FRAGMENT OF CBTAU-28.1(S32R;E35K) 9606
38 3HMW 2 H USTEKINUMAB FAB HEAVY CHAIN 9606
39 6FY1 1 H, Y CAP228-16H Heavy Chain 9606
40 4NRY 2 A, H m66 Light Chain 9606
41 5IBL 3 C, H 6639 Heavy Chain 9606