Sequence Similarity Clusters for the Entities in PDB 4HWE

Entity #1 | Chains: H
Fab heavy chain protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39520
95 % 1 2 30333 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 17 29 1582
70 % 870 2244 2
50 % 1799 4633 1
40 % 1799 4633 1
30 % 2033 5461 1
Entity #2 | Chains: L
Fab light chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40836
95 % 31 79 268 Flexibility: Low
Max RMSD: 6.0, Avg RMSD: 1.9
PDBFlex
90 % 257 701 3
70 % 878 2287 1
50 % 1800 4633 1
40 % 1800 4633 1
30 % 2034 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.