Sequence Similarity Clusters for the Entities in PDB 4HWB

Entity #1 | Chains: A
Interleukin-13 receptor subunit alpha-1 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68891
95 % 1 1 47336
90 % 1 1 44854
70 % 1 1 39308
50 % 1 1 33433
40 % 1 1 29518
30 % 1 1 24987
Entity #2 | Chains: H
Fab heavy chain protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 40685
95 % 2 2 31159
90 % 26 31 1393
70 % 1291 2376 2
50 % 2661 4913 1
40 % 2661 4913 1
30 % 3044 5780 1
Entity #3 | Chains: L
Fab light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 42049
95 % 47 85 251 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 1.9
PDBFlex
90 % 414 763 2
70 % 1304 2426 1
50 % 2662 4913 1
40 % 2662 4913 1
30 % 3045 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures