Sequence Similarity Clusters for the Entities in PDB 4HWB

Entity #1 | Chains: A
Interleukin-13 receptor subunit alpha-1 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58162
95 % 1 1 47588
90 % 1 1 45205
70 % 1 1 39710
50 % 1 1 33701
40 % 1 1 29523
30 % 1 1 24646
Entity #2 | Chains: H
Fab heavy chain protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 46209
95 % 2 2 38448 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 28 35 1196
70 % 1347 2497 2
50 % 2777 5152 1
40 % 3175 5806 1
30 % 3896 7240 1
Entity #3 | Chains: L
Fab light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40912
95 % 51 92 232 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 1.8
PDBFlex
90 % 421 778 2
70 % 1357 2538 1
50 % 2778 5152 1
40 % 3176 5806 1
30 % 3897 7240 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures