Sequence Similarity Clusters for the Entities in PDB 4HWB

Entity #1 | Chains: A
Interleukin-13 receptor subunit alpha-1 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69771
95 % 1 1 47925
90 % 1 1 45391
70 % 1 1 39761
50 % 1 1 33816
40 % 1 1 29858
30 % 1 1 25275
Entity #2 | Chains: H
Fab heavy chain protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 41226
95 % 2 2 31563
90 % 26 31 1416
70 % 1323 2429 2
50 % 2726 5021 1
40 % 2726 5021 1
30 % 3157 5951 1
Entity #3 | Chains: L
Fab light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 42610
95 % 49 90 246 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 1.9
PDBFlex
90 % 433 791 2
70 % 1336 2479 1
50 % 2727 5021 1
40 % 2727 5021 1
30 % 3158 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures