Sequence Similarity Clusters for the Entities in PDB 4HV8

Entity #1 | Chains: A,C
H-2 class I histocompatibility antigen, D-B alpha chain protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25127
95 % 4 50 333
90 % 4 52 347
70 % 236 656 7
50 % 236 661 7
40 % 249 709 11
30 % 268 826 14
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 78 240
95 % 37 212 65
90 % 37 212 70
70 % 290 856 5
50 % 294 876 4
40 % 294 876 9
30 % 294 876 13
Entity #3 | Chains: E,F
NPM6I variant peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.