Sequence Similarity Clusters for the Entities in PDB 4HV8

Entity #1 | Chains: A,C
H-2 class I histocompatibility antigen, D-B alpha chain protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26402
95 % 4 59 269
90 % 4 61 276
70 % 242 692 6
50 % 242 697 6
40 % 257 748 10
30 % 278 868 15
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 81 249
95 % 39 217 64
90 % 39 217 68
70 % 298 885 4
50 % 303 907 3
40 % 303 907 9
30 % 303 907 14
Entity #3 | Chains: E,F
NPM6I variant peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.