Sequence Similarity Clusters for the Entities in PDB 4HUX

Entity #1 | Chains: A
H-2 class I histocompatibility antigen, D-B alpha chain protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28853
95 % 15 68 275 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.2
PDBFlex
90 % 15 70 281
70 % 411 784 6
50 % 419 800 7
40 % 438 852 9
30 % 480 998 12
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 67 205 87
95 % 79 251 64 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 79 251 70
70 % 497 1011 4
50 % 507 1035 3
40 % 507 1035 6
30 % 507 1035 10
Entity #3 | Chains: C
NP peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures