Sequence Similarity Clusters for the Entities in PDB 4HUX

Entity #1 | Chains: A
H-2 class I histocompatibility antigen, D-B alpha chain protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27016
95 % 15 68 257 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.2
PDBFlex
90 % 15 70 265
70 % 383 740 6
50 % 389 754 7
40 % 408 806 9
30 % 438 930 12
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 59 189 68
95 % 71 234 62 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 71 234 66
70 % 457 944 4
50 % 465 966 3
40 % 465 966 6
30 % 465 966 9
Entity #3 | Chains: C
NP peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures