Sequence Similarity Clusters for the Entities in PDB 4HUX

Entity #1 | Chains: A
H-2 class I histocompatibility antigen, D-B alpha chain protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28214
95 % 15 68 271 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.2
PDBFlex
90 % 15 70 276
70 % 405 775 6
50 % 413 791 7
40 % 432 843 9
30 % 465 970 12
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 59 189 90
95 % 71 234 69 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 71 234 74
70 % 482 983 4
50 % 492 1007 3
40 % 492 1007 6
30 % 492 1007 9
Entity #3 | Chains: C
NP peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures