Sequence Similarity Clusters for the Entities in PDB 4HUW

Entity #1 | Chains: A,C,E,G
H-2 class I histocompatibility antigen, D-B alpha chain protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 43 55 207
95 % 46 59 269
90 % 47 61 276
70 % 619 692 6
50 % 621 697 6
40 % 662 748 10
30 % 735 868 15
Entity #2 | Chains: B,D,F,H
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 55 81 249
95 % 166 217 64
90 % 166 217 68
70 % 761 885 4
50 % 775 907 3
40 % 775 907 9
30 % 775 907 14
Entity #3 | Chains: I,J,K,L
NPM6T variant peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.