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An Information Portal to 105212 Biological Macromolecular Structures

Crystal Structure of H2Db-NPM6T
Sequence Clustering and Redundancy Reduction Results
4HUW
Sequence Clusters for the Sequence Entities in PDB 4HUW
Entity #1: Chains: A,C,E,G - H-2 class I histocompatibility antigen, D-B alpha chain protein, length: 281 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 31 41 239
95% 34 45 309
90% 35 47 321
70% 474 532 7
50% 476 537 7
40% 503 565 10
30% 513 587 15
Entity #2: Chains: B,D,F,H - Beta-2-microglobulin protein, length: 100 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 46 66 241
95% 143 187 25
90% 143 187 28
70% 586 690 5
50% 597 704 5
40% 597 704 6
30% 597 704 11
Entity #3: Chains: I,J,K,L - NPM6T variant peptide protein, length: 9 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.