Sequence Similarity Clusters for the Entities in PDB 4HUV

Entity #1 | Chains: A,D
H-2 class I histocompatibility antigen, D-B alpha chain protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 55 207
95 % 29 59 269
90 % 30 61 276
70 % 494 692 6
50 % 495 697 6
40 % 531 748 10
30 % 576 868 15
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 81 249
95 % 120 217 64
90 % 120 217 68
70 % 604 885 4
50 % 616 907 3
40 % 616 907 9
30 % 616 907 14
Entity #3 | Chains: C,F
NPM6W variant peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.