Sequence Similarity Clusters for the Entities in PDB 4HUV

Entity #1 | Chains: A,D
H-2 class I histocompatibility antigen, D-B alpha chain protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 55 201
95 % 29 59 261
90 % 30 61 265
70 % 480 668 7
50 % 481 673 7
40 % 516 723 10
30 % 558 840 15
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 79 244
95 % 118 215 64
90 % 118 215 68
70 % 588 861 5
50 % 600 883 5
40 % 600 883 9
30 % 600 883 14
Entity #3 | Chains: C,F
NPM6W variant peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.