Sequence Similarity Clusters for the Entities in PDB 4HUU

Entity #1 | Chains: A,D
H-2 class I histocompatibility antigen, D-B alpha chain protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 46 238
95 % 5 50 320
90 % 5 52 331
70 % 244 630 7
50 % 244 635 7
40 % 256 677 11
30 % 276 793 14
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 78 229
95 % 43 212 65
90 % 43 212 69
70 % 301 823 5
50 % 305 843 5
40 % 305 843 9
30 % 305 843 12
Entity #3 | Chains: C,F
NPM6I variant peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.