Sequence Similarity Clusters for the Entities in PDB 4HUM

Entity #1 | Chains: A
Multidrug efflux protein protein, length: 459 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 14176
95 % 2 5 13430 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.1
PDBFlex
90 % 2 5 13214
70 % 2 5 12406
50 % 2 5 11072
40 % 2 5 10050
30 % 2 7 5454
Entity #2 | Chains: B
Protein B protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 15587
95 % 2 5 14617 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 5 14340
70 % 32 37 1024
50 % 33 38 918
40 % 47 53 499
30 % 58 134 241

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.