Sequence Similarity Clusters for the Entities in PDB 4HUL

Entity #1 | Chains: A
Multidrug efflux protein protein, length: 459 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 15434
95 % 5 5 14382 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.1
PDBFlex
90 % 5 5 14112
70 % 5 5 13198
50 % 5 5 11704
40 % 5 5 10504
30 % 6 7 5641
Entity #2 | Chains: B
Protein B protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 15435
95 % 5 5 14383 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 5 14113
70 % 47 49 754
50 % 48 50 719
40 % 63 66 435
30 % 72 143 253

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3TEU 1 A Fibcon
2 5E95 1 B Mb(NS1) 9606
3 5DC4 2 B AS25 monobody 9606
4 4N5U 1 A Receptor-type tyrosine-protein phosphatase F Fibronectin type-III 4 domain, residues 601-705 9606 3.1.3.48 | Details
5 2RB8 1 A Tenascin unp residues 802-896 9606
6 5DC9 2 B AS25 monobody 9606
7 4WTX 1 A Integrin beta-4 Fourth FnIII domain, UNP residues 1572-1666 9606
8 4WTW 1 A, B Integrin beta-4 Third FnIII domain, UNP residues 1457-1548 9606
9 3MPC 1 A, B Fn3-like protein 1515
10 5N48 2 B, D Fibronectin 9606
11 5OC7 2 B, C monobody Mb(Bcr-PH_4) 32630
12 5N7E 1 A Mb(Bcr-DH_4) 32630
13 4LPV 1 A, B TENCON variant P41BR3-42 32630
14 3K2M 2 C, D Monobody HA4 9606
15 5L2H 1 A, B, C, D Centyrin Fibronectin type III domain variant 32630
16 4N68 1 A Contactin-5 Fibronectin type-III 3 domain, residues 871-971 9606
17 1FNA 1 A FIBRONECTIN CELL-ADHESION MODULE TYPE III-10 9606
18 1TEN 1 A TENASCIN 9606
19 3UYO 2 D Monobody SH13 9606
20 2E3V 1 A, B, C Neural cell adhesion molecule 1, 140 kDa isoform first fibronectin type III domain 9606
21 4LPY 1 A, B TENCON variant G10 32630
22 5MTJ 2 B Monobody Mb(Yes_1) Synthetic protein 9606
23 4LPX 1 A TENCON variant D4 32630
24 4U3H 1 A FN3con 32630
25 2CK2 1 A, B HUMAN FIBRONECTIN RESIDUES 1447-1542 9606
26 3T04 2 D MONOBODY 7C12 9606
27 3RZW 1 A, B Monobody ySMB-9 9606
28 5G15 2 B MB1 MONOBODY 32630
29 5DC0 1 A Fibronectin 9606
30 4JEG 2 B Monobody CS1 9606
31 5NKQ 2 E, F, G, H Monobody 9606
32 4JE4 2 B Monobody NSa1 9606
33 2RBL 1 A, B, M Tenascin unp residues 802-896 9606
34 5V7P 2 D monobody 32630
35 5MTM 2 B Monobody Mb(Lck_3) 10090
36 5DFT 1 A, B, C, D, E, F, G, H, I, J Fibronectin 9606
37 6APX 2 B Monobody YSX1 32630
38 4LPT 1 A, B, C, D, E, F TENCON variant P54CR4-31 32630
39 5KVM 3 C FN3 monobody alpha5 32630
40 3QHT 2 C, D Monobody ySMB-1 32630
41 5KBN 2 C, D monobody 9606
42 5J7C 2 C, D FNfn10-anti-lysozyme (DE0.4.1) 9606
43 3B83 1 A, B, C, D, E, F, G, H TEN-D3 9606
44 4OV6 3 F, G Adnectin 9606
45 4LPW 1 A, B TENCON variant A6 32630
46 6BX4 2 C, D Monobody Engineered human fibronectin type III domain 9606
47 6B2B 2 C, D monobody 9606
48 5A43 2 C, D MONOBODIES 9606
49 3QWQ 2 B ADNECTIN 9606
50 3TES 1 A, B, C, D Tencon
51 5KOM 2 C, D monobody 9606
52 6B2A 2 C, D monobody 9606
53 5J7K 1 A, B, C, D, E, F, G, H FN3con-a-lys 32630
54 2OCF 2 D Fibronectin E2#23 FN3 MONOBODY, Fibronectin type III Domain 10, Residues 1447-1540 9606
55 6B24 2 C, D monobody 9606
56 6BQO 2 C Monobody S8 9606
57 5ECJ 2 E, F Monobody Mb(S4) 9606
58 4M6A 1 A, B, C, D, E, F, G, H, I, J Tencon FN3-like domain 32630
59 5MTN 2 B Monobody Mb(Lck_1) 32630
60 4MMZ 3 C Fibronectin Fibronectin type-III domain 10 (UNP residues 1448-1540) 9606
61 6BX5 2 C, D Monobody S12 Engineered human fibronectin type III domain 9606
62 4MMY 3 C Fibronectin Fibronectin type-III domain 10 (UNP residues 1448-1540) 9606
63 6B2D 2 C, D monobody 9606
64 4MMX 3 C Fibronectin Fibronectin type-III domain 10 (UNP residues 1448-1540) 9606
65 3QWR 3 D ADNECTIN 9606
66 5C6P 2 B protein D 562
67 5A40 2 E, F, G, H MONOBODIES 9606
68 4LPU 1 A, B TENCON variant P40AR2-32R2 32630
69 4HUM 2 B Protein B 562
70 4HUN 2 B protein B 562
71 4HUK 2 B Protein B 562
72 4HUL 2 B Protein B 562
73 2N1K 1 A Fibronectin third FN3 domain (UNP residues 808-905) 9606
74 2MNU 1 A EDB 9606
75 2YUW 1 A Myosin binding protein C, slow type Fibronectin III domain 9606
76 2YUX 1 A Myosin-binding protein C, slow-type Fibronectin III domain 9606
77 2YRZ 1 A Integrin beta-4 fn3 9606
78 2EKJ 1 A Collagen alpha-1(XX) chain Fibronectin type III domain 9606
79 2EDX 1 A Protein tyrosine phosphatase, receptor type, F Fibronectin type III domain 9606 3.1.3.48 | Details
80 2EDY 1 A Receptor-type tyrosine-protein phosphatase F Fibronectin type III domain 9606 3.1.3.48 | Details
81 2EE2 1 A Contactin-1 Fibronectin type III domain 9606
82 2EE3 1 A Collagen alpha-1(XX) chain Fibronectin type III domain 9606
83 2ED7 1 A Netrin receptor DCC first fn3 domain, Fibronectin type-III 1 9606
84 2ED8 1 A Netrin receptor DCC second fn3 domain, Fibronectin type-III 2 9606
85 2ED9 1 A Netrin receptor DCC third fn3 domain 9606
86 2EDB 1 A Netrin receptor DCC fourth fn3 domain 9606
87 2EDD 1 A Netrin receptor DCC fifth fn3 domain 9606
88 2EDE 1 A Netrin receptor DCC sixth fn3 domain 9606
89 2E7H 1 A Ephrin type-B receptor 4 FN3 domain 9606 2.7.10.1 | Details
90 2H41 1 A Fibronectin Fibronectin type-III 2(2F3) 9606
91 2H45 1 A Fibronectin Fibronectin type-III 2(2F3) 9606
92 2DOC 1 A Neural cell adhesion molecule 2 Fibronectin type-III domain 9606
93 2DN7 1 A Receptor-type tyrosine-protein phosphatase F Fibronectin type III domain 9606 3.1.3.48 | Details
94 2DMK 1 A midline 2 isoform 2 fn3 domain 9606 2.3.2.27 | Details
95 2DM4 1 A Sortilin-related receptor FN3 9606
96 2DLH 1 A Receptor-type tyrosine-protein phosphatase delta fn3, Fibronectin type-III 9606 3.1.3.48 | Details
97 2DKM 1 A Collagen alpha-1(XX) chain Fibronectin type III domain 9606
98 2DJS 1 A Ephrin type-B receptor 1 Fibronectin type III domain 9606 2.7.10.1 | Details
99 2DJU 1 A Receptor-type tyrosine-protein phosphatase F Fibronectin type III domain 9606 3.1.3.48 | Details
100 2DB8 1 A Tripartite motif protein 9, isoform 2 Fibronectin type III domain 9606
101 2DBJ 1 A Proto-oncogene tyrosine-protein kinase MER precursor Fibronectin type III domain 9606 2.7.10.1 | Details
102 2CUH 1 A Tenascin-X the 31st fibronectin type III domain 9606
103 2CUI 1 A Tenascin-X the 29th fibronectin type III domain 9606
104 2CUM 1 A Tenascin-X fn3 domain 9606
105 2CSP 1 A RIM binding protein 2 fn3 domain 9606
106 2CRM 1 A Fibronectin type-III domain containing protein 3a fn3 9606
107 2CRZ 1 A Fibronectin type-III domain containing protein 3a Fibronectin type-III domain 9606
108 1X5X 1 A Fibronectin type-III domain containing protein 3a Fibronectin type-III domain 9606
109 1X5Y 1 A myosin binding protein C, fast-type Fibronectin type-III domain 10090
110 1X5Z 1 A Receptor-type tyrosine-protein phosphatase delta Fibronectin type-III domain 9606 3.1.3.48 | Details
111 1X5L 1 A Ephrin type-A receptor 8 fn3 domain 9606 2.7.10.1 | Details
112 1X4X 1 A Fibronectin type-III domain containing protein 3a fibronectin type III (fn3) domain 9606
113 1X4Y 1 A biregional cell adhesion molecule-related/down-regulated oncogenes (Cdon)binding protein fibronectin type III (fn3) domain 10090
114 1X4Z 1 A biregional cell adhesion molecule-related/down-regulated oncogenes (Cdon)binding protein fibronectin type III (fn3) domain 10090
115 1X5A 1 A Ephrin type-A receptor 1 Fibronectin type-III domain 10090 2.7.1.112 | Details
116 1X5F 1 A Neogenin fn3 domain 9606
117 1X5G 1 A Neogenin fn3 domain 9606
118 1X5H 1 A Neogenin fn3 domain 9606
119 1X5I 1 A Neogenin fn3 domain 9606
120 1X5J 1 A Neogenin fn3 domain 9606
121 1X5K 1 A Neogenin fn3 domain 9606
122 1X3D 1 A Fibronectin type-III domain containing protein 3a Fibronectin type-III domain 9606
123 1WK0 1 A KIAA0970 protein Fibronectin type3 domain 9606
124 1WIS 1 A KIAA1514 protein FNIII domain 9606
125 1WJ3 1 A KIAA1496 protein fn3 domain 9606
126 1WFU 1 A unnamed protein product FN3 domain 10090
127 1WF5 1 A sidekick 2 protein FNIII domain 9606
128 1WFN 1 A sidekick 2 FN3 domain 9606
129 1WFO 1 A sidekick 2 FN3 domain 9606
130 1WFT 1 A 1700129L13Rik protein FN3 domain 10090
131 1VA9 1 A Down syndrome cell adhesion molecule like-protein 1b FNIII domain 9606
132 1V5J 1 A KIAA1355 protein fn3 domain 9606
133 1UJT 1 A KIAA1568 protein FN3 domain 9606
134 1UEY 1 A KIAA0343 protein Fibronectin Type III Domain 9606
135 1UEM 1 A KIAA1568 Protein Fibronectin Type III domain 9606
136 1UEN 1 A KIAA0343 protein Fibronectin Type III Domain 9606
137 1OWW 1 A Fibronectin first type III module Residues 608-701 of SWS P02751 9606
138 1K85 1 A CHITINASE A1 FIBRONECTIN TYPE-III 1397 3.2.1.14 | Details
139 1J8K 1 A FIBRONECTIN EXTRA DOMAIN 2 (RESIDUES 1631-1724) 9606
140 2FNB 1 A PROTEIN (FIBRONECTIN) TYPE III DOMAIN 9606
141 1BPV 1 A TITIN 71 TH DOMAIN FROM THE A-BAND 9606 2.7.11.1 | Details
142 1TTF 1 A FIBRONECTIN 9606
143 1TTG 1 A FIBRONECTIN 9606