Sequence Similarity Clusters for the Entities in PDB 4HUL

Entity #1 | Chains: A
Multidrug efflux protein protein, length: 459 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 16580
95 % 5 5 15434 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.1
PDBFlex
90 % 5 5 15139
70 % 5 5 14099
50 % 5 5 12464
40 % 5 5 11167
30 % 6 7 5970
Entity #2 | Chains: B
Protein B protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 16581
95 % 5 5 15435 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 5 15140
70 % 53 55 705
50 % 54 56 678
40 % 70 74 436
30 % 79 151 261

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5C6P 2 B protein D 562
2 4HUM 2 B Protein B 562
3 4HUN 2 B protein B 562
4 4HUK 2 B Protein B 562
5 4HUL 2 B Protein B 562