Sequence Similarity Clusters for the Entities in PDB 4HUK

Entity #1 | Chains: A
Multidrug efflux protein protein, length: 459 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 18628
95 % 4 5 17241 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.1
PDBFlex
90 % 4 5 17051
70 % 4 5 15842
50 % 4 5 14374
40 % 4 5 13351
30 % 4 7 7535
Entity #2 | Chains: B
Protein B protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 17038
95 % 4 5 16023 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 4 5 15788
70 % 52 55 698
50 % 48 51 807
40 % 48 51 846
30 % 48 51 885

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures