Sequence Similarity Clusters for the Entities in PDB 4HUK

Entity #1 | Chains: A
Multidrug efflux protein protein, length: 459 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 14203
95 % 4 5 13451 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.1
PDBFlex
90 % 4 5 13234
70 % 4 5 12424
50 % 4 5 11082
40 % 4 5 10062
30 % 4 7 5466
Entity #2 | Chains: B
Protein B protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 15619
95 % 4 5 14644 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 4 5 14365
70 % 34 37 1024
50 % 35 38 918
40 % 49 53 499
30 % 60 134 241

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.