Sequence Similarity Clusters for the Entities in PDB 4HTP

Entity #1 | Chains: A,B
DNA ligase 4 protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29696
95 % 1 2 25916 Flexibility: Medium
Max RMSD: 6.9, Avg RMSD: 4.8
PDBFlex
90 % 1 2 25009
70 % 1 2 22649
50 % 1 2 19443
40 % 1 2 17191
30 % 1 2 14414
Entity #2 | Chains: C,E
Protein artemis protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures