Sequence Similarity Clusters for the Entities in PDB 4HTP

Entity #1 | Chains: A,B
DNA ligase 4 protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27276
95 % 1 2 22778 Flexibility: Medium
Max RMSD: 6.9, Avg RMSD: 4.8
PDBFlex
90 % 1 2 22105
70 % 1 2 20269
50 % 1 2 17563
40 % 1 2 15667
30 % 1 2 13398
Entity #2 | Chains: C,E
Protein artemis protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.