Sequence Similarity Clusters for the Entities in PDB 4HSU

Entity #1 | Chains: A
Lysine-specific histone demethylase 1B protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 9 3693
95 % 2 10 3811
90 % 2 10 3841
70 % 2 10 3775
50 % 2 10 3666
40 % 2 10 3520
30 % 2 10 3274
Entity #2 | Chains: B
Putative oxidoreductase GLYR1 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 14117
95 % 2 5 13302
90 % 2 5 13064
70 % 2 5 12285
50 % 2 5 10990
40 % 2 5 10000
30 % 2 5 8693
Entity #3 | Chains: C
Histone H3 protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67794
95 % 6 27 903
90 % 6 27 931
70 % 6 27 971
50 % 6 27 1015
40 % 6 27 1040
30 % 6 27 1026

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.