Sequence Similarity Clusters for the Entities in PDB 4HSU

Entity #1 | Chains: A
Lysine-specific histone demethylase 1B protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 9 3440
95 % 2 10 3597
90 % 2 10 3628
70 % 2 10 3581
50 % 2 10 3458
40 % 2 10 3333
30 % 2 10 3100
Entity #2 | Chains: B
Putative oxidoreductase GLYR1 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 13230
95 % 2 5 12519
90 % 2 5 12283
70 % 2 5 11572
50 % 2 5 10375
40 % 2 5 9462
30 % 2 5 8252
Entity #3 | Chains: C
Histone H3 protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64321
95 % 5 25 920
90 % 5 25 948
70 % 5 25 994
50 % 5 25 1033
40 % 5 25 1057
30 % 5 25 1036

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.