Sequence Similarity Clusters for the Entities in PDB 4HSU

Entity #1 | Chains: A
Lysine-specific histone demethylase 1B protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 9 3662
95 % 2 10 3785
90 % 2 10 3808
70 % 2 10 3744
50 % 2 10 3640
40 % 2 10 3496
30 % 2 10 3248
Entity #2 | Chains: B
Putative oxidoreductase GLYR1 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 14006
95 % 2 5 13215
90 % 2 5 12980
70 % 2 5 12205
50 % 2 5 10920
40 % 2 5 9939
30 % 2 5 8640
Entity #3 | Chains: C
Histone H3 protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67306
95 % 6 27 899
90 % 6 27 927
70 % 6 27 968
50 % 6 27 1009
40 % 6 27 1033
30 % 6 27 1021

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.