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An Information Portal to 109093 Biological Macromolecular Structures

Crystal structure of LSD2-NPAC with H3(1-26)in space group P21
Sequence Clustering and Redundancy Reduction Results
4HSU
Sequence Clusters for the Sequence Entities in PDB 4HSU
Entity #1: Chains: A - Lysine-specific histone demethylase 1B protein, length: 776 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 3157
95% 2 10 3312
90% 2 10 3345
70% 2 10 3321
50% 2 10 3252
40% 2 10 3135
30% 2 10 2911
Entity #2: Chains: B - Putative oxidoreductase GLYR1 protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 5 12315
95% 2 5 11686
90% 2 5 11497
70% 2 5 10874
50% 2 5 9762
40% 2 5 8915
30% 2 5 7796
Entity #3: Chains: C - Histone H3 protein, length: 30 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 60642
95% 5 25 844
90% 5 25 874
70% 5 25 908
50% 5 25 954
40% 5 25 985
30% 5 25 970
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.