Sequence Similarity Clusters for the Entities in PDB 4HSU

Entity #1 | Chains: A
Lysine-specific histone demethylase 1B protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 9 3559
95 % 2 10 3706
90 % 2 10 3728
70 % 2 10 3673
50 % 2 10 3553
40 % 2 10 3424
30 % 2 10 3191
Entity #2 | Chains: B
Putative oxidoreductase GLYR1 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 13658
95 % 2 5 12898
90 % 2 5 12658
70 % 2 5 11904
50 % 2 5 10668
40 % 2 5 9735
30 % 2 5 8470
Entity #3 | Chains: C
Histone H3 protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65960
95 % 6 26 932
90 % 6 26 956
70 % 6 26 1001
50 % 6 26 1042
40 % 6 26 1069
30 % 6 26 1042

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.