Sequence Similarity Clusters for the Entities in PDB 4HRT

Entity #1 | Chains: A,C,E,G
Globin-2 A chain protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 9510
95 % 2 2 9664 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 2 9554
70 % 2 2 9118
50 % 6 68 328
40 % 6 68 348
30 % 6 68 351
Entity #2 | Chains: B,D,F,H
Hemoglobin B chain protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 9497
95 % 2 2 9653 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 2 9542
70 % 2 2 9108
50 % 7 68 328
40 % 7 68 348
30 % 7 68 351

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures