Sequence Similarity Clusters for the Entities in PDB 4HRT

Entity #1 | Chains: A,C,E,G
Globin-2 A chain protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 10128
95 % 2 2 9895 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 2 9772
70 % 2 2 9662
50 % 6 68 368
40 % 6 68 396
30 % 7 77 366
Entity #2 | Chains: B,D,F,H
Hemoglobin B chain protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 10130
95 % 2 2 9897 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 2 2 9774
70 % 2 2 9314
50 % 7 68 368
40 % 7 68 396
30 % 8 77 366

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures