Sequence Similarity Clusters for the Entities in PDB 4HQQ

Entity #1 | Chains: H
CH58 Fab heavy chain protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 38171
95 % 3 4 13810 Flexibility: Medium
Max RMSD: 6.3, Avg RMSD: 3.7
PDBFlex
90 % 17 28 1559
70 % 863 2178 1
50 % 1787 4501 1
40 % 1787 4501 1
30 % 2013 5303 1
Entity #2 | Chains: L
CH58 Fab light chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39319
95 % 4 5 11971 Flexibility: Medium
Max RMSD: 7.3, Avg RMSD: 3.5
PDBFlex
90 % 8 11 3477
70 % 154 394 10
50 % 1788 4501 1
40 % 1788 4501 1
30 % 2014 5303 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.