Sequence Similarity Clusters for the Entities in PDB 4HQQ

Entity #1 | Chains: H
CH58 Fab heavy chain protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40878
95 % 3 4 14837 Flexibility: Medium
Max RMSD: 6.3, Avg RMSD: 3.7
PDBFlex
90 % 20 31 1414
70 % 964 2424 2
50 % 1999 5011 1
40 % 1999 5011 1
30 % 2290 5941 1
Entity #2 | Chains: L
CH58 Fab light chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 42103
95 % 4 5 12881 Flexibility: Medium
Max RMSD: 7.3, Avg RMSD: 3.5
PDBFlex
90 % 8 11 3749
70 % 976 2474 1
50 % 2000 5011 1
40 % 2000 5011 1
30 % 2291 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures