Sequence Similarity Clusters for the Entities in PDB 4HQB

Entity #1 | Chains: A,B,C,D,E
Single-stranded DNA-binding protein DdrB protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 5794
95 % 2 2 6359
90 % 2 2 6340
70 % 2 2 6189
50 % 2 2 5764
40 % 2 2 5396
30 % 2 2 4842
Entity #2 | Chains: M
5'-D(*TP*TP*TP*T)-3' dna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: N
5'-D(P*TP*TP*TP*TP*T)-3' dna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.