Sequence Similarity Clusters for the Entities in PDB 4HPY

Entity #1 | Chains: H
CH59 Fab heavy chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58048
95 % 1 2 22225 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.9
PDBFlex
90 % 1 207 42
70 % 26 2197 1
50 % 52 4537 1
40 % 52 4537 1
30 % 63 5342 1
Entity #2 | Chains: L
CH59 Fab light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58944
95 % 1 2 22412 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.7
PDBFlex
90 % 1 59 349
70 % 5 398 10
50 % 53 4537 1
40 % 53 4537 1
30 % 64 5342 1
Entity #3 | Chains: P
Envelope glycoprotein gp160 protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.