Sequence Similarity Clusters for the Entities in PDB 4HPY

Entity #1 | Chains: H
CH59 Fab heavy chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59727
95 % 1 2 22966 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 2.0
PDBFlex
90 % 1 224 38
70 % 28 2282 2
50 % 56 4717 1
40 % 56 4717 1
30 % 67 5571 1
Entity #2 | Chains: L
CH59 Fab light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60662
95 % 1 2 23155 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.9
PDBFlex
90 % 1 63 349
70 % 28 2329 1
50 % 57 4717 1
40 % 57 4717 1
30 % 68 5571 1
Entity #3 | Chains: P
Envelope glycoprotein gp160 protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.