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Crystal structure of RV144-elicited antibody CH58 in complex with V2 peptide
Sequence Clustering and Redundancy Reduction Results
4HPO
Sequence Clusters for the Sequence Entities in PDB 4HPO
Entity #1: Chains: H - CH58 Fab heavy chain protein, length: 231 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 30309
95% 1 2 23483
90% 2 13 3572
70% 91 1528 2
50% 186 3170 1
40% 186 3171 1
30% 200 3753 1
Entity #2: Chains: L - CH58 Fab light chain protein, length: 216 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 31244
95% 1 3 17833
90% 1 4 7957
70% 16 247 18
50% 187 3170 1
40% 187 3171 1
30% 201 3753 1
Entity #3: Chains: P - Envelope glycoprotein gp160 protein, length: 19 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.