Sequence Similarity Clusters for the Entities in PDB 4HPO

Entity #1 | Chains: H
CH58 Fab heavy chain protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 34466
95 % 1 4 12461
90 % 2 17 2866
70 % 118 1866 1
50 % 241 3846 1
40 % 241 3847 1
30 % 259 4574 1
Entity #2 | Chains: L
CH58 Fab light chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 35525
95 % 1 5 10778
90 % 1 6 6056
70 % 19 326 14
50 % 242 3846 1
40 % 242 3847 1
30 % 260 4574 1
Entity #3 | Chains: P
Envelope glycoprotein gp160 protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.