Sequence Similarity Clusters for the Entities in PDB 4HPK

Entity #1 | Chains: A
Collagenase protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 10195
95 % 3 5 9933 Flexibility: Low
Max RMSD: 7.3, Avg RMSD: 1.9
PDBFlex
90 % 3 5 9811
70 % 3 5 9343
50 % 3 5 8487
40 % 3 5 7732
30 % 3 5 6056
Entity #2 | Chains: B
Collagenase protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 10195
95 % 4 5 9933 Flexibility: Low
Max RMSD: 7.3, Avg RMSD: 1.9
PDBFlex
90 % 4 5 9811
70 % 4 5 9343
50 % 4 5 8487
40 % 4 5 7732
30 % 4 5 6056

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures