Sequence Similarity Clusters for the Entities in PDB 4HPK

Entity #1 | Chains: A
Collagenase protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 9449
95 % 3 5 9546 Flexibility: Low
Max RMSD: 7.3, Avg RMSD: 2.2
PDBFlex
90 % 3 5 9443
70 % 3 5 8989
50 % 3 5 8132
40 % 4 6 6409
30 % 4 6 5713
Entity #2 | Chains: B
Collagenase protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 9449
95 % 4 5 9546 Flexibility: Low
Max RMSD: 7.3, Avg RMSD: 2.2
PDBFlex
90 % 4 5 9443
70 % 4 5 8989
50 % 4 5 8132
40 % 5 6 6409
30 % 5 6 5713

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.