Sequence Similarity Clusters for the Entities in PDB 4HP1

Entity #1 | Chains: A,B
DNA (5'-D(*GP*CP*CP*AP*CP*(5CM)P*GP*GP*TP*GP*GP*C)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
LOC100036628 protein protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 42853
95 % 2 2 32016
90 % 2 2 30663
70 % 2 2 27458
50 % 2 2 23612
40 % 2 2 20870
30 % 2 2 17697

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.