Sequence Similarity Clusters for the Entities in PDB 4HOT

Entity #1 | Chains: A
Interferon-induced protein with tetratricopeptide repeats 5 protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 11085
95 % 6 6 10980 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 2.1
PDBFlex
90 % 6 6 10839
70 % 6 6 10260
50 % 10 12 4262
40 % 10 13 3574
30 % 10 13 3337
Entity #2 | Chains: X
RNA (5'-R(*(ATP)P*AP*AP*A)-3') rna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.