Sequence Similarity Clusters for the Entities in PDB 4HOT

Entity #1 | Chains: A
Interferon-induced protein with tetratricopeptide repeats 5 protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 11412
95 % 6 6 11296 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 2.1
PDBFlex
90 % 6 6 11146
70 % 6 6 10567
50 % 10 12 4392
40 % 10 13 3663
30 % 10 13 3424
Entity #2 | Chains: X
RNA (5'-R(*(ATP)P*AP*AP*A)-3') rna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures