Sequence Similarity Clusters for the Entities in PDB 4HNJ

Entity #1 | Chains: A,B
Bcl-2-like protein 1 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 6577
95 % 21 29 1603 Flexibility: Medium
Max RMSD: 22.5, Avg RMSD: 6.4
PDBFlex
90 % 21 29 1636
70 % 21 29 1650
50 % 21 29 1685
40 % 23 31 1497
30 % 23 31 1472
Entity #2 | Chains: C
Bcl-2-binding component 3 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 30901
95 % 2 3 25590
90 % 3 5 13607
70 % 5 7 7934
50 % 5 7 7315
40 % 5 7 6802
30 % 5 7 6066

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures