Sequence Similarity Clusters for the Entities in PDB 4HNJ

Entity #1 | Chains: A,B
Bcl-2-like protein 1 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 6699
95 % 21 29 1624 Flexibility: Medium
Max RMSD: 22.5, Avg RMSD: 6.4
PDBFlex
90 % 21 29 1656
70 % 21 29 1675
50 % 21 29 1716
40 % 23 31 1516
30 % 23 31 1498
Entity #2 | Chains: C
Bcl-2-binding component 3 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 31359
95 % 2 3 25967
90 % 3 5 13845
70 % 5 7 8074
50 % 5 7 7439
40 % 5 7 6912
30 % 5 7 6166

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures