Sequence Similarity Clusters for the Entities in PDB 4HN6

Entity #1 | Chains: A,B
Glucocorticoid receptor protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44672
95 % 8 10 2493 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.1
PDBFlex
90 % 10 12 1883
70 % 10 12 1908
50 % 10 12 1917
40 % 10 12 1919
30 % 16 18 1543
Entity #2 | Chains: C
DNA (5'-D(*CP*GP*CP*CP*TP*CP*CP*GP*GP*GP*AP*GP*AP*GP*CP*T)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D
DNA (5'-D(*AP*GP*CP*TP*CP*TP*CP*CP*CP*GP*GP*AP*GP*GP*CP*G)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.