Sequence Similarity Clusters for the Entities in PDB 4HN5

Entity #1 | Chains: A,B
Glucocorticoid receptor protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46149
95 % 2 10 2597 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.1
PDBFlex
90 % 2 12 1961
70 % 2 12 1986
50 % 2 12 1991
40 % 2 12 1982
30 % 2 18 1594
Entity #2 | Chains: C
DNA (5'-D(*CP*GP*CP*CP*TP*CP*CP*GP*GP*GP*AP*GP*AP*GP*CP*T)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D
DNA (5'-D(*AP*GP*CP*TP*CP*TP*CP*CP*CP*GP*GP*AP*GP*GP*CP*G)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.