Sequence Similarity Clusters for the Entities in PDB 4HMA

Entity #1 | Chains: A,B
Matrix metalloproteinase-9 protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 2650
95 % 10 18 1581 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.8
PDBFlex
90 % 10 18 1612
70 % 10 18 1616
50 % 124 232 103
40 % 127 236 125
30 % 127 236 132

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures