Sequence Similarity Clusters for the Entities in PDB 4HLQ

Entity #1 | Chains: A,C,E,G,I
TBC1 domain family member 20 protein, length: 305 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 11636
95 % 2 2 11329
90 % 2 2 11170
70 % 2 2 10549
50 % 2 2 9508
40 % 2 2 8645
30 % 2 2 7562
Entity #2 | Chains: B,D,F,H,J
Ras-related protein Rab-1B protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 4918
95 % 13 16 1650
90 % 15 18 1551
70 % 17 20 1475
50 % 73 84 274
40 % 379 424 26
30 % 652 749 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.