Sequence Similarity Clusters for the Entities in PDB 4HLQ

Entity #1 | Chains: A,C,E,G,I
TBC1 domain family member 20 protein, length: 305 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 10464
95 % 2 2 10272
90 % 2 2 10137
70 % 2 2 9595
50 % 2 2 8684
40 % 2 2 7937
30 % 2 2 7000
Entity #2 | Chains: B,D,F,H,J
Ras-related protein Rab-1B protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 4415
95 % 13 16 1479
90 % 13 16 1506
70 % 15 18 1420
50 % 62 72 264
40 % 351 387 29
30 % 604 693 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.