Sequence Similarity Clusters for the Entities in PDB 4HKY

Entity #1 | Chains: A,B
Beta-lactamase NDM-1 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 27 630
95 % 27 37 569 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 1.1
PDBFlex
90 % 31 41 550
70 % 31 41 593
50 % 31 41 632
40 % 31 41 660
30 % 143 193 151

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.