Sequence Similarity Clusters for the Entities in PDB 4HKP

Entity #1 | Chains: A,B
Uridine 5'-monophosphate synthase protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 3302
95 % 3 9 4064 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 3 9 4104
70 % 22 38 816
50 % 22 45 591
40 % 22 45 626
30 % 22 45 611

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2P1F 1 A Uridine 5'-monophosphate synthase OMPdecase (Residues 190-480) 9606
2 3G3D 1 A, B Uridine 5'-monophosphate synthase UNP residues 190-480, Orotidine 5'-phosphate decarboxylase domain 9606 4.1.1.23 | Details
3 4HKP 1 A, B Uridine 5'-monophosphate synthase UNP residues 190-480 9606 4.1.1.23 | Details
4 3BVJ 1 A, B Uridine 5'-monophosphate synthase OMPdecase, residues 190-480 9606 4.1.1.23 | Details
5 4HIB 1 A, B Uridine 5'-monophosphate synthase UNP residues 190-480 9606 4.1.1.23 | Details
6 3BGG 1 A Uridine 5'-monophosphate synthase Orotidine 5'-phosphate decarboxylase 9606 4.1.1.23 | Details
7 3BGJ 1 A, B Uridine 5'-monophosphate synthase 5'-monophosphate synthase 9606 4.1.1.23 | Details
8 3MW7 1 A, B Uridine 5'-monophosphate synthase residues 190-480 9606 4.1.1.23 | Details
9 2EAW 1 A, B Uridine 5'-monophosphate synthase Orotidine 5'-Monophosphate Decarboxylase Domain, residues 1-291 (190-480) 9606 2.4.2.10 | Details 4.1.1.23 | Details