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An Information Portal to 106082 Biological Macromolecular Structures

Structure of Cowpox CPXV203 in complex with MHCI (H-2Kb)
Sequence Clustering and Redundancy Reduction Results
4HKJ
Sequence Clusters for the Sequence Entities in PDB 4HKJ
Entity #1: Chains: A,E,I,M - H-2 class I histocompatibility antigen, K-B alpha chain protein, length: 280 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 45 49 262
95% 61 65 282
90% 65 70 260
70% 519 548 7
50% 521 553 7
40% 549 581 10
30% 632 681 13
Entity #2: Chains: B,F,J,N - Beta-2-microglobulin protein, length: 100 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 434 466 2
95% 462 495 3
90% 470 503 3
70% 657 709 5
50% 668 723 5
40% 668 723 6
30% 668 723 11
Entity #3: Chains: C,G,K,O - Ovalbumin protein, length: 8 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: D,H,L,P - CPXV203 protein protein, length: 206 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 16333
95% 1 1 14387
90% 1 1 14049
70% 1 1 13091
50% 1 1 11485
40% 1 1 10289
30% 1 1 8873
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.