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Structure of Cowpox CPXV203 in complex with MHCI (H-2Kb)
Sequence Clustering and Redundancy Reduction Results
4HKJ
Sequence Clusters for the Sequence Entities in PDB 4HKJ
Entity #1: Chains: A,E,I,M - H-2 class I histocompatibility antigen, K-B alpha chain protein, length: 280 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 41 44 293
95% 57 60 296
90% 61 65 287
70% 498 525 7
50% 500 530 7
40% 528 558 10
30% 545 580 15
Entity #2: Chains: B,F,J,N - Beta-2-microglobulin protein, length: 100 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 413 444 2
95% 441 473 3
90% 449 481 3
70% 632 682 5
50% 643 696 5
40% 643 696 6
30% 643 696 11
Entity #3: Chains: C,G,K,O - Ovalbumin protein, length: 8 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: D,H,L,P - CPXV203 protein protein, length: 206 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 15904
95% 1 1 14047
90% 1 1 13719
70% 1 1 12792
50% 1 1 11226
40% 1 1 10060
30% 1 1 8689
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.