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Structure of Cowpox CPXV203 in complex with MHCI (H-2Kb)
Sequence Clustering and Redundancy Reduction Results
4HKJ
Sequence Clusters for the Sequence Entities in PDB 4HKJ
Entity #1: Chains: A,E,I,M - H-2 class I histocompatibility antigen, K-B alpha chain protein, length: 280 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 45 49 267
95% 61 65 296
90% 65 70 276
70% 529 558 7
50% 531 563 7
40% 559 591 11
30% 643 692 13
Entity #2: Chains: B,F,J,N - Beta-2-microglobulin protein, length: 100 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 445 477 2
95% 473 506 3
90% 481 514 3
70% 668 720 5
50% 679 734 5
40% 679 734 8
30% 679 734 11
Entity #3: Chains: C,G,K,O - Ovalbumin protein, length: 8 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: D,H,L,P - CPXV203 protein protein, length: 206 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 16676
95% 1 1 14618
90% 1 1 14271
70% 1 1 13301
50% 1 1 11665
40% 1 1 10451
30% 1 1 9004
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.