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Structure of Cowpox CPXV203 in complex with MHCI (H-2Kb)
Sequence Clustering and Redundancy Reduction Results
4HKJ
Sequence Clusters for the Sequence Entities in PDB 4HKJ
Entity #1: Chains: A,E,I,M - H-2 class I histocompatibility antigen, K-B alpha chain protein, length: 280 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 45 49 271
95% 61 65 299
90% 65 70 286
70% 535 564 7
50% 537 569 7
40% 567 605 11
30% 655 712 13
Entity #2: Chains: B,F,J,N - Beta-2-microglobulin protein, length: 100 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 451 483 2
95% 479 512 3
90% 487 520 3
70% 678 732 5
50% 690 750 5
40% 690 750 9
30% 690 750 11
Entity #3: Chains: C,G,K,O - Ovalbumin protein, length: 8 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: D,H,L,P - CPXV203 protein protein, length: 206 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 17146
95% 1 1 15022
90% 1 1 14663
70% 1 1 13672
50% 1 1 11989
40% 1 1 10745
30% 1 1 9249
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.