Sequence Similarity Clusters for the Entities in PDB 4HJA

Entity #1 | Chains: A
Protection of telomeres protein 1 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 5545
95 % 11 12 5813 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 11 12 5829
70 % 11 12 5695
50 % 11 12 5375
40 % 11 12 5028
30 % 11 12 4477
Entity #2 | Chains: B
DNA (5'-D(*AP*CP*GP*GP*TP*TP*AP*CP*GP*GP*T)-3') dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures