Sequence Similarity Clusters for the Entities in PDB 4HJA

Entity #1 | Chains: A
Protection of telomeres protein 1 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 5975
95 % 11 12 6246 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 11 12 6239
70 % 11 12 6087
50 % 11 12 5712
40 % 11 12 5331
30 % 11 12 4735
Entity #2 | Chains: B
DNA (5'-D(*AP*CP*GP*GP*TP*TP*AP*CP*GP*GP*T)-3') dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures