POP-OUT | CLOSE

An Information Portal to 106858 Biological Macromolecular Structures

T. maritima RNase H2 G21S in complex with nucleic acid substrate and calcium ions
Sequence Clustering and Redundancy Reduction Results
4HHT
Sequence Clusters for the Sequence Entities in PDB 4HHT
Entity #1: Chains: A - Ribonuclease HII protein, length: 237 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 46285
95% 5 5 11040
90% 5 5 10881
70% 5 5 10301
50% 5 5 9252
40% 5 5 8440
30% 5 5 7409
Entity #2: Chains: C - DNA (5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3') dna, length: 12 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: D - DNA/RNA (5'-D(*GP*AP*CP*AP*C)-R(P*C)-D(P*TP*GP*AP*TP*TP*C)-3') hybrid, length: 12 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.