Sequence Similarity Clusters for the Entities in PDB 4HHM

Entity #1 | Chains: A,B,C,D,E,F,G,H
Xylose isomerase protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 7821
95 % 11 12 2376 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.4
PDBFlex
90 % 77 81 466
70 % 77 81 501
50 % 88 114 245
40 % 88 114 273
30 % 88 114 285

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures