Sequence Similarity Clusters for the Entities in PDB 4HHB

Entity #1 | Chains: A,C
HEMOGLOBIN (DEOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 209 26
95 % 21 240 34 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 22 241 35
70 % 28 322 17
50 % 68 734 5
40 % 68 739 8
30 % 214 1182 8
Entity #2 | Chains: B,D
HEMOGLOBIN (DEOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 159 53
95 % 20 240 33 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 20 245 32
70 % 27 336 13
50 % 69 734 5
40 % 69 739 8
30 % 215 1182 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2W72 1 A HUMAN HEMOGLOBIN A CHAIN ALPHA, RESIDUES 2-142 9606
2 2W72 3 C HUMAN HEMOGLOBIN A CHAIN ALPHA, RESIDUES 2-142 9606
3 1IRD 1 A Hemoglobin alpha chain 9606
4 2DN2 1 A, C Hemoglobin alpha subunit 9606
5 2DN3 1 A Hemoglobin alpha subunit 9606
6 2DN1 1 A Hemoglobin alpha subunit 9606
7 1J41 1 A, C, E, G Hemoglobin alpha Chain 9606
8 1J40 1 A, C, E, G Hemoglobin alpha Chain 9606
9 1BAB 1 A, C HEMOGLOBIN THIONVILLE (DEOXY) (ALPHA CHAIN) 9606
10 3S66 1 A Hemoglobin subunit alpha 9606
11 2D5Z 1 A, C Hemoglobin alpha subunit 9606
12 1BZ0 1 A, C PROTEIN (HEMOGLOBIN ALPHA CHAIN) 9606
13 1UIW 1 A, C, E, G Hemoglobin alpha chain 9606
14 1J3Y 1 A, C, E, G Hemoglobin alpha Chain 9606
15 3QJD 1 A, C Hemoglobin subunit alpha 9606
16 1THB 1 A, C HEMOGLOBIN A (OXY) (ALPHA CHAIN) 9606
17 1BZZ 1 A, C PROTEIN (HEMOGLOBIN ALPHA CHAIN) 9606
18 1J3Z 1 A, C, E, G Hemoglobin alpha Chain 9606
19 1BZ1 1 A, C PROTEIN (HEMOGLOBIN ALPHA CHAIN) 9606
20 3NMM 1 A, C Hemoglobin subunit alpha 9606
21 4HHB 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
22 1J7Y 1 A, C Hemoglobin alpha chain 9606
23 1DXV 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
24 1DXT 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
25 1DXU 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
26 3DUT 1 A, C Hemoglobin subunit alpha 9606
27 1SDK 1 A, C HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY 9606
28 2HHB 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
29 1QSH 1 A, C PROTEIN (HEMOGLOBIN ALPHA CHAIN) 9606
30 4ROL 1 A, C Hemoglobin subunit alpha 9606
31 1SDL 1 A, C HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY 9606
32 1BBB 1 A, C HEMOGLOBIN A (CARBONMONOXY) (ALPHA CHAIN) 9606
33 1QSI 1 A, C PROTEIN (HEMOGLOBIN ALPHA CHAIN) 9606
34 4MQG 1 A Hemoglobin subunit alpha 9606
35 2D60 1 A, C Hemoglobin alpha subunit 9606
36 2W6V 1 A, C HEMOGLOBIN SUBUNIT ALPHA CHAIN ALPHA, RESIDUES 2-142 9606
37 1GBU 1 A, C HEMOGLOBIN DEOXY 9606
38 1NQP 1 A, C Hemoglobin alpha chain 9606
39 1QI8 1 A, C HEMOGLOBIN ALPHA CHAIN 9606
40 1A01 1 A, C HEMOGLOBIN (ALPHA CHAIN) 9606
41 1A3N 1 A, C HEMOGLOBIN (ALPHA CHAIN) 9606
42 3QJB 1 A Hemoglobin subunit alpha 9606
43 5E83 1 A, C Hemoglobin subunit alpha 9606
44 1YE2 1 A, C Hemoglobin alpha chain 9606
45 1A3O 1 A, C HEMOGLOBIN (ALPHA CHAIN) 9606
46 1O1O 1 A, C Hemoglobin Alpha chain 9606
47 5KSI 1 A, C Hemoglobin subunit alpha 9606
48 5E6E 1 A Hemoglobin subunit alpha 9606
49 4MQJ 1 A, C, E, G Hemoglobin subunit alpha 9606
50 3HHB 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
51 1R1Y 1 A, C Hemoglobin alpha chain 9606
52 1K0Y 1 A, C hemoglobin alpha chain 9606
53 1YVQ 1 A, C Hemoglobin alpha chain 9606
54 5UCU 1 A Hemoglobin subunit alpha 9606
55 1C7B 1 A, C PROTEIN (DEOXYHEMOGLOBIN (ALPHA CHAIN)) 9606
56 3NL7 1 A Hemoglobin subunit alpha 9606
57 1SHR 1 A, C Hemoglobin alpha chain 9606
58 1Y4V 1 A, C Hemoglobin alpha chain 9606
59 5URC 1 A, C Hemoglobin subunit alpha 9606
60 1G9V 1 A, C HEMOGLOBIN ALPHA CHAIN 9606
61 1YVT 1 A Hemoglobin alpha chain 9606
62 1CLS 1 A, C HEMOGLOBIN CROSS-LINKED DEOXY FORM 9606
63 1VWT 1 A, C HEMOGLOBIN ALPHA AQUOMET, BETA DEOXY 9606
64 1QXE 1 A, C Hemoglobin alpha chain alpha chain 9606
65 1RQ3 1 A, C Hemoglobin alpha chain 9606
66 1XZ2 1 A, C Hemoglobin alpha chain 9606
67 3QJE 1 A, C Hemoglobin subunit alpha 9606
68 4L7Y 1 A, C Hemoglobin subunit alpha 9606
69 5SW7 1 A Hemoglobin subunit alpha 9606
70 1XZ7 1 A, C Hemoglobin alpha chain 9606
71 3D7O 1 A Hemoglobin subunit alpha 9606
72 3IC0 1 A, C Hemoglobin subunit alpha 9606
73 1BUW 1 A, C PROTEIN (HEMOGLOBIN) THE SULFHYDRYL GROUPS OF CYSTEINE 93 OF BETA SUBUNITS ARE S-NITROSYLATED. THE HEME GROUPS ARE NITROSYLATED. 9606
74 1XXT 1 A, C Hemoglobin alpha chain 9606
75 1HBB 1 A, C HEMOGLOBIN A (DEOXY) (ALPHA CHAIN) 9606
76 1KD2 1 A, C Hemoglobin alpha chain 9606
77 5E29 1 A, C Hemoglobin subunit alpha 9606
78 3WHM 1 A, E Hemoglobin subunit alpha 9606
79 1A0Z 1 A, C HEMOGLOBIN (ALPHA CHAIN) 9606
80 1Y83 1 A, C Hemoglobin alpha chain 9606
81 1A00 1 A, C HEMOGLOBIN (ALPHA CHAIN) 9606
82 1Y7Z 1 A, C Hemoglobin alpha chain 9606
83 4N8T 1 A Hemoglobin subunit alpha 9606
84 2HBS 1 A, C, E, G HEMOGLOBIN S (DEOXY), ALPHA CHAIN 9606
85 1Y7D 1 A, C Hemoglobin alpha chain 9606
86 1Y4G 1 A, C Hemoglobin alpha chain 9606
87 4MQI 1 A Hemoglobin subunit alpha 9606
88 1Y45 1 A, C Hemoglobin alpha chain 9606
89 4NI1 1 A Hemoglobin subunit alpha 9606
90 1J7W 1 A, C hemoglobin alpha chain 9606
91 2HHD 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
92 1YIH 1 A, C Hemoglobin alpha chain 9606
93 1K1K 1 A HEMOGLOBIN ALPHA CHAIN 9606
94 3OO4 1 A Hemoglobin subunit alpha 9606
95 1GBV 1 A, C HEMOGLOBIN ALPHA-OXY, BETA-DEOXY, T STATE 9606
96 2HBE 1 A HEMOGLOBIN A (N-BUTYL ISOCYANIDE) (ALPHA CHAIN) 9606
97 1Y4F 1 A, C Hemoglobin alpha chain 9606
98 1XY0 1 A, C Hemoglobin alpha chain 9606
99 4ROM 1 A, C Hemoglobin subunit alpha 9606
100 1XZ4 1 A, C Hemoglobin alpha chain 9606
101 1Y5J 1 A, C Hemoglobin alpha chain 9606
102 1Y4P 1 A, C Hemoglobin alpha chain 9606
103 1Y2Z 1 A, C Hemoglobin alpha chain 9606
104 4X0L 1 A Hemoglobin subunit alpha 9606
105 1HDB 1 A, C HEMOGLOBIN (DEOXY) BETA-V67T ALPHA-BETA-ALPHA-BETA TETRAMER 9606
106 1YHE 1 A, C Hemoglobin alpha chain 9606
107 5U3I 1 A, C Hemoglobin subunit alpha 9606
108 1XZV 1 A, C Hemoglobin alpha chain 9606
109 3S65 1 A, C Hemoglobin subunit alpha 9606
110 6HBW 1 A, C PROTEIN (HEMOGLOBIN ALPHA 1) 9606
111 1Y31 1 A, C Hemoglobin alpha chain 9606
112 1Y0D 1 A, C Hemoglobin alpha chain Residues 1-140 9606
113 3QJC 1 A Hemoglobin subunit alpha 9606
114 1Y85 1 A, C Hemoglobin alpha chain 9606
115 1HBA 1 A, C HEMOGLOBIN ROTHSCHILD (DEOXY) (ALPHA CHAIN) 9606
116 1AJ9 1 A HEMOGLOBIN (ALPHA CHAIN) 9606
117 2HBC 1 A HEMOGLOBIN A (ETHYL ISOCYANIDE) (ALPHA CHAIN) 9606
118 1Y0W 1 A, C Hemoglobin alpha chain 9606
119 1XZ5 1 A, C Hemoglobin alpha chain 9606
120 1Y0T 1 A, C Hemoglobin alpha chain 9606
121 1Y4Q 1 A, C Hemoglobin alpha chain 9606
122 1Y35 1 A, C Hemoglobin alpha chain 9606
123 1J7S 1 A, C Hemoglobin alpha chain 9606
124 1Y5F 1 A, C Hemoglobin alpha chain 9606
125 3WCP 1 A, C Hemoglobin subunit alpha 9606
126 1A0U 1 A, C HEMOGLOBIN (ALPHA CHAIN) 9606
127 1RPS 1 A, C Hemoglobin alpha chain 9606
128 1Y7G 1 A, C Hemoglobin alpha chain 9606
129 1Y5K 1 A, C Hemoglobin alpha chain 9606
130 1Y22 1 A, C Hemoglobin alpha chain 9606
131 1O1K 1 A, C Hemoglobin Alpha chain 9606
132 1XZU 1 A, C Hemoglobin alpha chain 9606
133 1Y09 1 A, C Hemoglobin alpha chain 9606
134 1RQA 1 A, C Hemoglobin alpha chain 9606
135 1Y4R 1 A, C Hemoglobin alpha chain 9606
136 1GZX 1 A, C HEMOGLOBIN ALPHA CHAIN LIGANDED T STATE 9606
137 1Y4B 1 A, C Hemoglobin alpha chain 9606
138 2HHE 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
139 2HBD 1 A HEMOGLOBIN A (METHYL ISOCYANIDE) (ALPHA CHAIN) 9606
140 3P5Q 1 A Hemoglobin subunit alpha 9606
141 1DKE 1 A, C HEMOGLOBIN: ALPHA CHAIN 9606
142 1HGA 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9606
143 1HGC 1 A, C HEMOGLOBIN (OXY) (ALPHA CHAIN) 9606
144 2HBF 1 A HEMOGLOBIN A (N-PROPYL ISOCYANIDE) (ALPHA CHAIN) 9606
145 1Y0A 1 A, C Hemoglobin alpha chain 9606
146 1YEV 1 A, C Hemoglobin alpha chain 9606
147 1YZI 1 A Hemoglobin alpha chain 9606
148 3HXN 1 A, C Hemoglobin subunit alpha 9606
149 5UFJ 1 A, C Hemoglobin subunit alpha 9606
150 1XYE 1 A, C Hemoglobin alpha chain 9606
151 1RQ4 1 A, C Hemoglobin alpha chain 9606
152 2YRS 1 A, C, I, M Hemoglobin subunit alpha 9606
153 5KDQ 1 A, C Hemoglobin subunit alpha 9606
154 1Y7C 1 A, C Hemoglobin alpha chain 9606
155 4MQK 1 A, C, E, G Hemoglobin subunit alpha 9606
156 4M4B 1 A Hemoglobin subunit alpha 9606
157 1HGB 1 A, C HEMOGLOBIN (AQUO MET) (ALPHA CHAIN) 9606
158 1YEO 1 A, C Hemoglobin alpha chain 9606
159 1Y0C 1 A, C Hemoglobin alpha chain 9606
160 1YEU 1 A, C Hemoglobin alpha chain 9606
161 4M4A 1 A Hemoglobin subunit alpha 9606
162 1O1I 1 A Hemoglobin Alpha chain 9606
163 1YH9 1 A, C Hemoglobin alpha chain 9606
164 1MKO 1 A, C Hemoglobin alpha chain 9606
165 1Y46 1 A, C Hemoglobin alpha chain 9606
166 1LJW 1 A hemoglobin alpha chain 9606
167 3ONZ 1 A Hemoglobin subunit alpha Hemoglobin Chain A 9606
168 1HHO 1 A HEMOGLOBIN A (OXY) (ALPHA CHAIN) 9606
169 1M9P 1 A, C Hemoglobin alpha chain 9606
170 1BIJ 1 A, C HEMOGLOBIN A LYS B82/D82 CROSSLINKED HEMOGLOBIN 9606
171 1HAB 1 A, C HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY FORM 9606
172 1R1X 1 A Hemoglobin alpha chain 9606
173 3R5I 1 A, C Hemoglobin subunit alpha 9606
174 3OO5 1 A Hemoglobin subunit alpha 9606
175 1NEJ 1 A, C Hemoglobin alpha chain alpha chain 9606
176 4MQC 1 A Hemoglobin subunit alpha 9606
177 4NI0 1 A Hemoglobin subunit alpha 9606
178 1SI4 1 A, C Hemoglobin alpha chain 9606
179 1RVW 1 A HEMOGLOBIN CARBONMONXY HEMES 9606
180 1YIE 1 A, C Hemoglobin alpha chain 9606
181 1B86 1 A, C PROTEIN (HEMOGLOBIN; ALPHA CHAIN) 9606
182 5EE4 2 C, E Hemoglobin subunit alpha 9606
183 1HAC 1 A, C HEMOGLOBIN A CROSS-LINKED, CARBONMONOXY FORM 9606
184 5HY8 1 A, C, E, G, S Hemoglobin subunit alpha 9606
185 1QXD 1 A, C Hemoglobin alpha chain alpha chain 9606
186 4FC3 1 A Hemoglobin subunit alpha 9606
187 1YE0 1 A, C Hemoglobin alpha chain 9606
188 3IC2 1 A, C Hemoglobin subunit alpha 9606
189 4MQH 1 A Hemoglobin subunit alpha 9606
190 1YHR 1 A, C Hemoglobin alpha chain 9606
191 5KSJ 1 A, C Hemoglobin subunit alpha 9606
192 1Z8U 2 B, D Hemoglobin alpha chain 9606
193 1YFF 1 A, C, E, G Hemoglobin alpha chain 9606
194 1LFQ 1 A Hemoglobin alpha chain 9606
195 1LFT 1 A Hemoglobin alpha chain 9606
196 3B75 1 A, C, E, G, S Hemoglobin subunit alpha 9606
197 1YGF 1 A, C Hemoglobin alpha chain 9606
198 1YG5 1 A, C Hemoglobin alpha chain 9606
199 1LFL 1 A, C, P, R Hemoglobin alpha chain 9606
200 1YDZ 1 A, C Hemoglobin alpha chain 9606
201 1YEN 1 A, C Hemoglobin alpha chain 9606
202 1NIH 1 A, C HEMOGLOBIN (NICKELOUS DEOXY) (ALPHA CHAIN) 9606
203 1YGD 1 A, C Hemoglobin alpha chain 9606
204 1A9W 1 A, C HEMOGLOBIN (ALPHA CHAIN) HUMAN GOWER II EMBRYONIC HEMOGLOBIN 9606
205 1YEQ 1 A, C Hemoglobin alpha chain 9606
206 1FN3 1 A, C HEMOGLOBIN ALPHA CHAIN 9606
207 1Y8W 1 A, C Hemoglobin alpha chain 9606
208 5HU6 1 A Hemoglobin subunit alpha 9606
209 1LFV 1 A Hemoglobin alpha chain 9606
210 4N7O 1 A, C, E, G, I, K Hemoglobin subunit alpha UNP residues 2-142 9606
211 4XS0 1 A Hemoglobin subunit alpha 9606
212 1LFZ 1 A Hemoglobin alpha chain 9606
213 4N7N 1 A, C, E, G, I, K Hemoglobin subunit alpha UNP residues 2-142 9606
214 1JY7 1 A, C, P, R, U, W Hemoglobin alpha chain 9606
215 5JDO 3 C Hemoglobin subunit alpha 9606
216 5JDO 5 E Hemoglobin subunit alpha 9606
217 3D17 1 A, C Hemoglobin subunit alpha 9606
218 3OVU 3 C Hemoglobin subunit alpha 9606
219 4N7P 1 A, C, E, G, I, K Hemoglobin subunit alpha UNP residues 2-142 9606
220 1LFY 1 A Hemoglobin alpha chain 9606
221 3S48 2 C, D Hemoglobin subunit alpha 9606
222 3SZK 1 A, D Hemoglobin subunit alpha 9606
223 1Y01 2 B Hemoglobin alpha chain 9606
224 3IA3 2 B, D Hemoglobin subunit alpha 9606
225 1HBS 1 A, C, E, G HEMOGLOBIN S (DEOXY) (ALPHA CHAIN) 9606
226 4WJG 1 A, F, K, P, U, Z Hemoglobin subunit alpha 9606
227 1CMY 1 A, C HEMOGLOBIN YPSILANTI (CARBONMONOXY) (ALPHA CHAIN) 9606
228 3ODQ 1 A, C Hemoglobin subunit alpha 9606
229 4IJ2 1 A, C Hemoglobin subunit alpha 9606
230 1YE1 1 A, C Hemoglobin alpha chain 9606
231 5NI1 1 A, C Hemoglobin subunit alpha 9606
232 2M6Z 1 A, C Hemoglobin subunit alpha 9606
233 3KMF 1 A, E Hemoglobin subunit alpha 9606
234 2DXM 1 A, C Hemoglobin subunit alpha 9606
235 2H35 1 A, C Hemoglobin alpha subunit 9606
236 1GLI 1 A, C DEOXYHEMOGLOBIN 9606
237 1COH 1 A, C HEMOGLOBIN (FERROUS CARBONMONOXY) (ALPHA CHAIN) 9606
238 1HCO 1 A HEMOGLOBIN (CARBONMONOXY) (ALPHA CHAIN) 9606
239 2HCO 1 A HEMOGLOBIN (CARBONMONOXY) (ALPHA CHAIN) 9606
240 1FDH 1 A, B HEMOGLOBIN F (DEOXY) (ALPHA CHAIN) 9606