Sequence Similarity Clusters for the Entities in PDB 4HGW

Entity #1 | Chains: A
Antibody Fab fragment, light chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 3461
95 % 5 62 445 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.7
PDBFlex
90 % 5 84 306
70 % 109 2426 1
50 % 229 4913 1
40 % 229 4913 1
30 % 247 5780 1
Entity #2 | Chains: B
Antibody Fab fragment, heavy chain protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 3456
95 % 3 22 2749 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 3 39 1037
70 % 112 2376 2
50 % 230 4913 1
40 % 230 4913 1
30 % 248 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures