Sequence Similarity Clusters for the Entities in PDB 4HGW

Entity #1 | Chains: A
Antibody Fab fragment, light chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 3372
95 % 5 62 394 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.7
PDBFlex
90 % 5 83 309
70 % 100 2329 1
50 % 210 4717 1
40 % 210 4717 1
30 % 227 5571 1
Entity #2 | Chains: B
Antibody Fab fragment, heavy chain protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 3367
95 % 3 22 2677 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 3 38 1102
70 % 103 2282 2
50 % 211 4717 1
40 % 211 4717 1
30 % 228 5571 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.