Sequence Similarity Clusters for the Entities in PDB 4HGW

Entity #1 | Chains: A
Antibody Fab fragment, light chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 3514
95 % 5 62 453 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.7
PDBFlex
90 % 5 84 309
70 % 112 2479 1
50 % 236 5021 1
40 % 236 5021 1
30 % 274 5951 1
Entity #2 | Chains: B
Antibody Fab fragment, heavy chain protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 3509
95 % 3 22 2793 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 3 39 1050
70 % 115 2429 2
50 % 237 5021 1
40 % 237 5021 1
30 % 275 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures