Sequence Similarity Clusters for the Entities in PDB 4HGW

Entity #1 | Chains: A
Antibody Fab fragment, light chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 26 1810
95 % 3 58 460 Flexibility: Low
Max RMSD: 5.6, Avg RMSD: 1.7
PDBFlex
90 % 5 91 270
70 % 113 2553 1
50 % 240 5180 1
40 % 313 5834 1
30 % 386 7269 1
Entity #2 | Chains: B
Antibody Fab fragment, heavy chain protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 3715
95 % 3 22 2790 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 3 39 1053
70 % 116 2511 2
50 % 241 5180 1
40 % 314 5834 1
30 % 387 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures