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Crystal structure of Fab 2G1 in complex with a H2N2 influenza virus hemagglutinin
Sequence Clustering and Redundancy Reduction Results
4HG4
Sequence Clusters for the Sequence Entities in PDB 4HG4
Entity #1: Chains: A,B,C,D,E,F,G,H,I - Hemagglutinin HA1 protein, length: 327 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 4576
95% 10 10 2067
90% 11 11 1761
70% 74 75 106
50% 118 119 45
40% 214 225 15
30% 220 231 22
Entity #2: Chains: a,b,c,d,e,f,g,h,i - Hemagglutinin HA2 protein, length: 174 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 7 7 2260
95% 11 11 1736
90% 74 75 92
70% 119 120 27
50% 209 220 10
40% 217 230 14
30% 217 230 23
Entity #3: Chains: J,L,N,P,R,T,V,X,Z - Fab 2G1 heavy chain protein, length: 223 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 5364
95% 1 1 5964
90% 18 18 1504
70% 1403 1535 2
50% 2910 3184 1
40% 2911 3185 1
30% 3450 3767 1
Entity #4: Chains: K,M,O,Q,S,U,W,Y,z - Fab 2G1 light chain protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 5392
95% 1 1 5995
90% 340 379 5
70% 1223 1337 3
50% 2911 3184 1
40% 2912 3185 1
30% 3451 3767 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.