Sequence Similarity Clusters for the Entities in PDB 4HG4

Entity #1 | Chains: A,B,C,D,E,F,G,H,I
Hemagglutinin HA1 protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 5381
95 % 10 10 2406
90 % 11 11 2047
70 % 83 85 140
50 % 146 148 71
40 % 245 259 16
30 % 251 265 27
Entity #2 | Chains: a,b,c,d,e,f,g,h,i
Hemagglutinin HA2 protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 2653
95 % 11 11 2017
90 % 84 86 123
70 % 145 149 29
50 % 241 257 11
40 % 249 267 15
30 % 249 267 26
Entity #3 | Chains: J,L,N,P,R,T,V,X,Z
Fab 2G1 heavy chain protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 6292
95 % 1 1 6868
90 % 24 24 1227
70 % 1740 1932 1
50 % 3590 3985 1
40 % 3591 3986 1
30 % 4268 4715 1
Entity #4 | Chains: K,M,O,Q,S,U,W,Y,z
Fab 2G1 light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 6321
95 % 1 1 6895
90 % 454 518 3
70 % 1480 1639 3
50 % 3591 3985 1
40 % 3592 3986 1
30 % 4269 4715 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.