Sequence Similarity Clusters for the Entities in PDB 4HG4

Entity #1 | Chains: A,B,C,D,E,F,G,H,I
Hemagglutinin HA1 protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 5309
95 % 10 10 2378
90 % 11 11 2025
70 % 83 84 143
50 % 146 147 61
40 % 245 257 15
30 % 251 263 26
Entity #2 | Chains: a,b,c,d,e,f,g,h,i
Hemagglutinin HA2 protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 2620
95 % 11 11 1997
90 % 84 85 123
70 % 145 148 28
50 % 241 255 11
40 % 249 265 14
30 % 249 265 25
Entity #3 | Chains: J,L,N,P,R,T,V,X,Z
Fab 2G1 heavy chain protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 6210
95 % 1 1 6788
90 % 24 24 1206
70 % 1723 1909 1
50 % 3552 3934 1
40 % 3553 3935 1
30 % 4229 4663 1
Entity #4 | Chains: K,M,O,Q,S,U,W,Y,z
Fab 2G1 light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 6239
95 % 1 1 6815
90 % 443 503 3
70 % 1463 1617 3
50 % 3553 3934 1
40 % 3554 3935 1
30 % 4230 4663 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.