Sequence Similarity Clusters for the Entities in PDB 4HFU

Entity #1 | Chains: A
Hemagglutinin HA1 protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 5381
95 % 6 10 2406
90 % 6 11 2047
70 % 66 85 140
50 % 106 148 71
40 % 176 259 16
30 % 178 265 27
Entity #2 | Chains: B
Hemagglutinin HA2 protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 2653
95 % 6 11 2017
90 % 66 86 123
70 % 105 149 29
50 % 176 257 11
40 % 180 267 15
30 % 180 267 26
Entity #3 | Chains: H
Fab 8M2 heavy chain protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53512
95 % 1 1 37646
90 % 1 1 36024
70 % 1431 1932 1
50 % 2956 3985 1
40 % 2957 3986 1
30 % 3486 4715 1
Entity #4 | Chains: L
Fab 8M2 light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54407
95 % 1 1 38139
90 % 375 518 3
70 % 1229 1639 3
50 % 2957 3985 1
40 % 2958 3986 1
30 % 3487 4715 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.