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Crystal structure of Fab 8M2 in complex with a H2N2 influenza virus hemagglutinin
Sequence Clustering and Redundancy Reduction Results
4HFU
Sequence Clusters for the Sequence Entities in PDB 4HFU
Entity #1: Chains: A - Hemagglutinin HA1 protein, length: 327 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 4729
95% 6 10 2129
90% 6 11 1809
70% 59 75 134
50% 86 123 48
40% 159 234 15
30% 161 240 25
Entity #2: Chains: B - Hemagglutinin HA2 protein, length: 174 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 7 2327
95% 6 11 1783
90% 59 75 120
70% 88 124 28
50% 159 229 10
40% 163 239 14
30% 163 239 26
Entity #3: Chains: H - Fab 8M2 heavy chain protein, length: 226 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 48115
95% 1 1 33982
90% 1 1 32594
70% 1223 1614 2
50% 2532 3339 1
40% 2533 3340 1
30% 2968 3953 1
Entity #4: Chains: L - Fab 8M2 light chain protein, length: 215 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 48900
95% 1 1 34418
90% 312 414 4
70% 1072 1404 3
50% 2533 3339 1
40% 2534 3340 1
30% 2969 3953 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.