POP-OUT | CLOSE

An Information Portal to 110790 Biological Macromolecular Structures

Crystal structure of Fab 8M2 in complex with a H2N2 influenza virus hemagglutinin
Sequence Clustering and Redundancy Reduction Results
4HFU
Sequence Clusters for the Sequence Entities in PDB 4HFU
Entity #1: Chains: A - Hemagglutinin HA1 protein, length: 327 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 4796
95% 6 10 2155
90% 6 11 1833
70% 59 76 134
50% 86 124 49
40% 159 235 15
30% 161 241 25
Entity #2: Chains: B - Hemagglutinin HA2 protein, length: 174 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 7 2350
95% 6 11 1809
90% 59 77 121
70% 88 126 28
50% 159 231 11
40% 163 241 14
30% 163 241 26
Entity #3: Chains: H - Fab 8M2 heavy chain protein, length: 226 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 48555
95% 1 1 34280
90% 1 1 32874
70% 1254 1656 1
50% 2595 3425 1
40% 2596 3426 1
30% 3035 4043 1
Entity #4: Chains: L - Fab 8M2 light chain protein, length: 215 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 49355
95% 1 1 34722
90% 320 425 4
70% 1094 1434 3
50% 2596 3425 1
40% 2597 3426 1
30% 3036 4043 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.