Sequence Similarity Clusters for the Entities in PDB 4HFU

Entity #1 | Chains: A
Hemagglutinin HA1 protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 5194
95 % 6 10 2312
90 % 6 11 1978
70 % 66 84 140
50 % 106 147 52
40 % 176 257 15
30 % 178 263 26
Entity #2 | Chains: B
Hemagglutinin HA2 protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 2551
95 % 6 11 1953
90 % 66 85 119
70 % 105 148 27
50 % 176 255 11
40 % 180 265 14
30 % 180 265 25
Entity #3 | Chains: H
Fab 8M2 heavy chain protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51998
95 % 1 1 36607
90 % 1 1 35045
70 % 1376 1846 1
50 % 2838 3804 1
40 % 2839 3805 1
30 % 3350 4512 1
Entity #4 | Chains: L
Fab 8M2 light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52867
95 % 1 1 37086
90 % 350 475 4
70 % 1180 1565 3
50 % 2839 3804 1
40 % 2840 3805 1
30 % 3351 4512 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.