Sequence Similarity Clusters for the Entities in PDB 4HFU

Entity #1 | Chains: A
Hemagglutinin HA1 protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 5865
95 % 6 10 2660
90 % 6 11 2268
70 % 66 85 154
50 % 106 151 84
40 % 192 279 18
30 % 195 286 28
Entity #2 | Chains: B
Hemagglutinin HA2 protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 2879
95 % 6 11 2226
90 % 66 86 136
70 % 105 152 46
50 % 192 277 12
40 % 196 287 17
30 % 196 287 29
Entity #3 | Chains: H
Fab 8M2 heavy chain protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57127
95 % 1 1 40138
90 % 1 1 38361
70 % 1578 2145 1
50 % 3268 4435 1
40 % 3268 4435 1
30 % 3845 5225 1
Entity #4 | Chains: L
Fab 8M2 light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58081
95 % 2 4 13758
90 % 489 665 3
70 % 1345 1803 2
50 % 3269 4435 1
40 % 3269 4435 1
30 % 3846 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.