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An Information Portal to 107049 Biological Macromolecular Structures

Crystal structure of Fab 8M2 in complex with a H2N2 influenza virus hemagglutinin
Sequence Clustering and Redundancy Reduction Results
4HFU
Sequence Clusters for the Sequence Entities in PDB 4HFU
Entity #1: Chains: A - Hemagglutinin HA1 protein, length: 327 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 4588
95% 6 10 2072
90% 6 11 1763
70% 59 75 107
50% 82 119 46
40% 154 225 15
30% 156 231 22
Entity #2: Chains: B - Hemagglutinin HA2 protein, length: 174 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 7 2265
95% 6 11 1737
90% 59 75 93
70% 84 120 28
50% 154 220 10
40% 158 230 14
30% 158 230 23
Entity #3: Chains: H - Fab 8M2 heavy chain protein, length: 226 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 46825
95% 1 1 33065
90% 1 1 31742
70% 1176 1537 2
50% 2441 3188 1
40% 2442 3189 1
30% 2858 3771 1
Entity #4: Chains: L - Fab 8M2 light chain protein, length: 215 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 47597
95% 1 1 33495
90% 288 380 5
70% 1036 1339 3
50% 2442 3188 1
40% 2443 3189 1
30% 2859 3771 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.