Sequence Similarity Clusters for the Entities in PDB 4HFU

Entity #1 | Chains: A
Hemagglutinin HA1 protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 5752
95 % 6 10 2616
90 % 6 11 2240
70 % 66 85 152
50 % 106 151 80
40 % 180 266 17
30 % 182 272 28
Entity #2 | Chains: B
Hemagglutinin HA2 protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 2832
95 % 6 11 2195
90 % 66 86 133
70 % 105 152 44
50 % 180 264 11
40 % 184 274 16
30 % 184 274 27
Entity #3 | Chains: H
Fab 8M2 heavy chain protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56300
95 % 1 1 39561
90 % 1 1 37825
70 % 1553 2096 1
50 % 3218 4337 1
40 % 3218 4337 1
30 % 3781 5109 1
Entity #4 | Chains: L
Fab 8M2 light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57251
95 % 2 4 13528
90 % 473 640 3
70 % 1323 1765 2
50 % 3219 4337 1
40 % 3219 4337 1
30 % 3782 5109 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.