Sequence Similarity Clusters for the Entities in PDB 4HFU

Entity #1 | Chains: A
Hemagglutinin HA1 protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 5309
95 % 6 10 2378
90 % 6 11 2025
70 % 66 84 143
50 % 106 147 61
40 % 176 257 15
30 % 178 263 26
Entity #2 | Chains: B
Hemagglutinin HA2 protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 2620
95 % 6 11 1997
90 % 66 85 123
70 % 105 148 28
50 % 176 255 11
40 % 180 265 14
30 % 180 265 25
Entity #3 | Chains: H
Fab 8M2 heavy chain protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53065
95 % 1 1 37321
90 % 1 1 35717
70 % 1419 1909 1
50 % 2928 3934 1
40 % 2929 3935 1
30 % 3457 4663 1
Entity #4 | Chains: L
Fab 8M2 light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53953
95 % 1 1 37813
90 % 369 503 3
70 % 1217 1617 3
50 % 2929 3934 1
40 % 2930 3935 1
30 % 3458 4663 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.