Sequence Similarity Clusters for the Entities in PDB 4HFF

Entity #1 | Chains: A
Putative cytoplasmic protein protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 6405
95 % 3 4 6568 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 3 4 6558
70 % 3 4 6361
50 % 5 6 4557
40 % 5 6 4292
30 % 5 6 3878
Entity #2 | Chains: B
Putative periplasmic protein protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 25640
95 % 3 3 22619 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 3 3 21902
70 % 3 3 20014
50 % 3 3 17264
40 % 3 3 15260
30 % 3 3 12779

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures