Sequence Similarity Clusters for the Entities in PDB 4HFF

Entity #1 | Chains: A
Putative cytoplasmic protein protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 5862
95 % 3 4 6523
90 % 3 4 6507
70 % 3 4 6346
50 % 5 6 4616
40 % 5 6 4382
30 % 5 6 4021
Entity #2 | Chains: B
Putative periplasmic protein protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 29930
95 % 3 3 24787 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 3 3 23969
70 % 3 3 21787
50 % 3 3 18846
40 % 3 3 16784
30 % 3 3 14374

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures