Sequence Similarity Clusters for the Entities in PDB 4HFF

Entity #1 | Chains: A
Putative cytoplasmic protein protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 6006
95 % 3 4 6664
90 % 3 4 6658
70 % 3 4 6482
50 % 5 6 4720
40 % 5 6 4470
30 % 5 6 4112
Entity #2 | Chains: B
Putative periplasmic protein protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 30573
95 % 3 3 25290 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 3 3 24439
70 % 3 3 22191
50 % 3 3 19167
40 % 3 3 17061
30 % 3 3 14601

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures