Sequence Similarity Clusters for the Entities in PDB 4HEA

Entity #1 | Chains: 1,B
NADH-quinone oxidoreductase subunit 1 protein, length: 438 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2434
95 % 1 7 3095
90 % 1 7 3145
70 % 1 7 3123
50 % 1 7 3035
40 % 1 7 2963
30 % 1 7 2763
Entity #10 | Chains: A,P
NADH-quinone oxidoreductase subunit 7 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 19868
95 % 1 2 17122
90 % 1 2 16664
70 % 1 2 15419
50 % 1 2 13492
40 % 1 2 12073
30 % 1 2 10373
Entity #11 | Chains: J,R
NADH-quinone oxidoreductase subunit 10 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 18558
95 % 1 2 16177
90 % 1 2 15758
70 % 1 2 14636
50 % 1 2 12822
40 % 1 2 11459
30 % 1 2 9846
Entity #12 | Chains: K,S
NADH-quinone oxidoreductase subunit 11 protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20312
95 % 1 2 17448
90 % 1 2 16972
70 % 1 2 15681
50 % 1 2 13718
40 % 1 2 12282
30 % 2 3 7467
Entity #13 | Chains: L,T
NADH-quinone oxidoreductase subunit 12 protein, length: 606 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 13898
95 % 1 2 13028
90 % 1 2 12782
70 % 1 2 12043
50 % 1 2 10797
40 % 2 3 7328
30 % 2 4 5971
Entity #14 | Chains: M,U
NADH-quinone oxidoreductase subunit 13 protein, length: 469 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 14446
95 % 1 2 13357
90 % 1 2 13100
70 % 1 2 12310
50 % 1 2 10996
40 % 1 2 9993
30 % 2 3 6555
Entity #15 | Chains: N,V
NADH-quinone oxidoreductase subunit 14 protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 14772
95 % 1 2 13575
90 % 1 2 13308
70 % 1 2 12494
50 % 1 2 11125
40 % 1 2 10097
30 % 2 3 6576
Entity #16 | Chains: H,Q
NADH-quinone oxidoreductase subunit 8 protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 15395
95 % 1 2 13969
90 % 1 2 13693
70 % 1 2 12833
50 % 1 2 11383
40 % 1 2 10294
30 % 1 2 8955
Entity #2 | Chains: 2,C
NADH-quinone oxidoreductase subunit 2 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2491
95 % 1 7 3167
90 % 1 7 3218
70 % 1 7 3194
50 % 1 7 3104
40 % 1 7 3026
30 % 1 7 2825
Entity #3 | Chains: 3,D
NADH-quinone oxidoreductase subunit 3 protein, length: 783 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2426
95 % 1 7 3079
90 % 1 7 3130
70 % 1 7 3106
50 % 1 7 3013
40 % 1 7 2935
30 % 1 7 2739
Entity #4 | Chains: 4,E
NADH-quinone oxidoreductase subunit 4 protein, length: 409 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2437
95 % 1 7 3102
90 % 1 7 3152
70 % 1 7 3128
50 % 1 7 3040
40 % 1 8 2762
30 % 1 8 2585
Entity #5 | Chains: 5,F
NADH-quinone oxidoreductase subunit 5 protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2485
95 % 1 7 3157
90 % 1 7 3208
70 % 1 7 3185
50 % 1 7 3098
40 % 1 7 3018
30 % 1 7 2812
Entity #6 | Chains: 6,G
NADH-quinone oxidoreductase subunit 6 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2492
95 % 1 7 3168
90 % 1 7 3219
70 % 1 7 3195
50 % 1 7 3105
40 % 1 7 3027
30 % 1 7 2826
Entity #7 | Chains: 9,O
NADH-quinone oxidoreductase subunit 9 protein, length: 182 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2490
95 % 1 7 3165
90 % 1 7 3216
70 % 1 7 3192
50 % 1 7 3103
40 % 1 7 3025
30 % 1 7 2823
Entity #8 | Chains: 7,I
NADH-quinone oxidoreductase subunit 15 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2515
95 % 1 7 3186
90 % 1 7 3236
70 % 1 7 3218
50 % 1 7 3129
40 % 1 7 3045
30 % 1 7 2848
Entity #9 | Chains: W,X
Putative uncharacterized protein TTHA1528 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 19525
95 % 3 3 16900
90 % 3 3 16454
70 % 3 3 15245
50 % 3 3 13344
40 % 3 3 11932
30 % 3 3 10247

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.