Sequence Similarity Clusters for the Entities in PDB 4HEA

Entity #1 | Chains: 1,B
NADH-quinone oxidoreductase subunit 1 protein, length: 438 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2774
95 % 1 7 3475
90 % 1 7 3522
70 % 1 7 3474
50 % 1 7 3384
40 % 1 11 2665
30 % 1 11 2491
Entity #10 | Chains: A,P
NADH-quinone oxidoreductase subunit 7 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 22105
95 % 1 2 18913
90 % 1 2 18413
70 % 1 2 17009
50 % 1 2 14832
40 % 1 2 13225
30 % 1 2 11329
Entity #11 | Chains: J,R
NADH-quinone oxidoreductase subunit 10 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20696
95 % 1 2 17904
90 % 1 2 17444
70 % 1 2 16161
50 % 1 2 14104
40 % 1 2 12562
30 % 1 2 10759
Entity #12 | Chains: K,S
NADH-quinone oxidoreductase subunit 11 protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 22587
95 % 1 2 19260
90 % 1 2 18743
70 % 1 2 17293
50 % 1 2 15080
40 % 1 2 13456
30 % 2 3 8155
Entity #13 | Chains: L,T
NADH-quinone oxidoreductase subunit 12 protein, length: 606 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 15589
95 % 1 2 14494
90 % 1 2 14224
70 % 1 2 13352
50 % 1 2 11918
40 % 2 3 8083
30 % 2 4 6558
Entity #14 | Chains: M,U
NADH-quinone oxidoreductase subunit 13 protein, length: 469 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 16205
95 % 1 2 14859
90 % 1 2 14578
70 % 1 2 13650
50 % 1 2 12135
40 % 1 2 10984
30 % 2 3 7190
Entity #15 | Chains: N,V
NADH-quinone oxidoreductase subunit 14 protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 16553
95 % 1 2 15089
90 % 1 2 14799
70 % 1 2 13847
50 % 1 2 12268
40 % 1 2 11094
30 % 2 3 7214
Entity #16 | Chains: H,Q
NADH-quinone oxidoreductase subunit 8 protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 17234
95 % 1 2 15523
90 % 1 2 15218
70 % 1 2 14211
50 % 1 2 12549
40 % 1 2 11310
30 % 1 2 9785
Entity #2 | Chains: 2,C
NADH-quinone oxidoreductase subunit 2 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2827
95 % 1 7 3552
90 % 1 7 3595
70 % 1 7 3543
50 % 1 7 3464
40 % 1 7 3349
30 % 1 7 3138
Entity #3 | Chains: 3,D
NADH-quinone oxidoreductase subunit 3 protein, length: 783 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2764
95 % 1 7 3454
90 % 1 7 3501
70 % 1 7 3453
50 % 1 7 3363
40 % 1 7 3255
30 % 1 7 3047
Entity #4 | Chains: 4,E
NADH-quinone oxidoreductase subunit 4 protein, length: 409 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2776
95 % 1 7 3483
90 % 1 7 3531
70 % 1 7 3480
50 % 1 7 3390
40 % 1 12 2551
30 % 1 12 2388
Entity #5 | Chains: 5,F
NADH-quinone oxidoreductase subunit 5 protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2820
95 % 1 7 3541
90 % 1 7 3584
70 % 1 7 3533
50 % 1 7 3455
40 % 1 7 3339
30 % 1 7 3125
Entity #6 | Chains: 6,G
NADH-quinone oxidoreductase subunit 6 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2828
95 % 1 7 3553
90 % 1 7 3596
70 % 1 7 3544
50 % 1 7 3465
40 % 1 7 3350
30 % 1 7 3139
Entity #7 | Chains: 9,O
NADH-quinone oxidoreductase subunit 9 protein, length: 182 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2826
95 % 1 7 3550
90 % 1 7 3593
70 % 1 7 3541
50 % 1 7 3463
40 % 1 7 3348
30 % 1 7 3137
Entity #8 | Chains: 7,I
NADH-quinone oxidoreductase subunit 15 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2852
95 % 1 7 3575
90 % 1 7 3616
70 % 1 7 3567
50 % 1 7 3490
40 % 1 7 3369
30 % 1 7 3164
Entity #9 | Chains: W,X
Putative uncharacterized protein TTHA1528 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 21748
95 % 3 3 18675
90 % 3 3 18187
70 % 3 3 16826
50 % 3 3 14675
40 % 3 3 13079
30 % 3 3 11199

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.