Sequence Similarity Clusters for the Entities in PDB 4HEA

Entity #1 | Chains: 1,B
NADH-quinone oxidoreductase subunit 1 protein, length: 438 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2589
95 % 1 7 3258
90 % 1 7 3308
70 % 1 7 3275
50 % 1 7 3197
40 % 1 7 3098
30 % 1 7 2890
Entity #10 | Chains: A,P
NADH-quinone oxidoreductase subunit 7 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20925
95 % 1 2 17960
90 % 1 2 17485
70 % 1 2 16181
50 % 1 2 14129
40 % 1 2 12626
30 % 1 2 10827
Entity #11 | Chains: J,R
NADH-quinone oxidoreductase subunit 10 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 19572
95 % 1 2 16988
90 % 1 2 16556
70 % 1 2 15369
50 % 1 2 13436
40 % 1 2 11987
30 % 1 2 10276
Entity #12 | Chains: K,S
NADH-quinone oxidoreductase subunit 11 protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 21387
95 % 1 2 18295
90 % 1 2 17801
70 % 1 2 16452
50 % 1 2 14365
40 % 1 2 12847
30 % 2 3 7836
Entity #13 | Chains: L,T
NADH-quinone oxidoreductase subunit 12 protein, length: 606 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 14700
95 % 1 2 13739
90 % 1 2 13488
70 % 1 2 12697
50 % 1 2 11359
40 % 2 3 7725
30 % 2 4 6285
Entity #14 | Chains: M,U
NADH-quinone oxidoreductase subunit 13 protein, length: 469 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 15276
95 % 1 2 14079
90 % 1 2 13817
70 % 1 2 12972
50 % 1 2 11562
40 % 1 2 10489
30 % 2 3 6901
Entity #15 | Chains: N,V
NADH-quinone oxidoreductase subunit 14 protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 15614
95 % 1 2 14298
90 % 1 2 14027
70 % 1 2 13158
50 % 1 2 11687
40 % 1 2 10591
30 % 2 3 6924
Entity #16 | Chains: H,Q
NADH-quinone oxidoreductase subunit 8 protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 16270
95 % 1 2 14715
90 % 1 2 14429
70 % 1 2 13509
50 % 1 2 11958
40 % 1 2 10796
30 % 1 2 9361
Entity #2 | Chains: 2,C
NADH-quinone oxidoreductase subunit 2 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2647
95 % 1 7 3333
90 % 1 7 3382
70 % 1 7 3346
50 % 1 7 3276
40 % 1 7 3171
30 % 1 7 2958
Entity #3 | Chains: 3,D
NADH-quinone oxidoreductase subunit 3 protein, length: 783 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2580
95 % 1 7 3243
90 % 1 7 3293
70 % 1 7 3260
50 % 1 7 3176
40 % 1 7 3075
30 % 1 7 2869
Entity #4 | Chains: 4,E
NADH-quinone oxidoreductase subunit 4 protein, length: 409 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2591
95 % 1 7 3265
90 % 1 7 3315
70 % 1 7 3279
50 % 1 7 3201
40 % 1 8 2897
30 % 1 8 2714
Entity #5 | Chains: 5,F
NADH-quinone oxidoreductase subunit 5 protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2641
95 % 1 7 3323
90 % 1 7 3372
70 % 1 7 3337
50 % 1 7 3268
40 % 1 7 3162
30 % 1 7 2945
Entity #6 | Chains: 6,G
NADH-quinone oxidoreductase subunit 6 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2648
95 % 1 7 3334
90 % 1 7 3383
70 % 1 7 3347
50 % 1 7 3277
40 % 1 7 3172
30 % 1 7 2959
Entity #7 | Chains: 9,O
NADH-quinone oxidoreductase subunit 9 protein, length: 182 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2646
95 % 1 7 3331
90 % 1 7 3380
70 % 1 7 3344
50 % 1 7 3275
40 % 1 7 3170
30 % 1 7 2957
Entity #8 | Chains: 7,I
NADH-quinone oxidoreductase subunit 15 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2671
95 % 1 7 3351
90 % 1 7 3400
70 % 1 7 3370
50 % 1 7 3302
40 % 1 7 3191
30 % 1 7 2982
Entity #9 | Chains: W,X
Putative uncharacterized protein TTHA1528 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 20579
95 % 3 3 17732
90 % 3 3 17270
70 % 3 3 16002
50 % 3 3 13977
40 % 3 3 12480
30 % 3 3 10698

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.