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An Information Portal to 108957 Biological Macromolecular Structures

Crystal structure of the entire respiratory complex I from Thermus thermophilus
Sequence Clustering and Redundancy Reduction Results
4HEA
Sequence Clusters for the Sequence Entities in PDB 4HEA
Entity #1: Chains: 1,B - NADH-quinone oxidoreductase subunit 1 protein, length: 438 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2246
95% 1 7 2841
90% 1 7 2877
70% 1 7 2885
50% 1 7 2853
40% 1 7 2797
30% 1 7 2602
Entity #10: Chains: A,P - NADH-quinone oxidoreductase subunit 7 protein, length: 119 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 18473
95% 1 2 15959
90% 1 2 15564
70% 1 2 14475
50% 1 2 12678
40% 1 2 11369
30% 1 2 9790
Entity #11: Chains: J,R - NADH-quinone oxidoreductase subunit 10 protein, length: 176 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 17256
95% 1 2 15072
90% 1 2 14709
70% 1 2 13726
50% 1 2 12037
40% 1 2 10776
30% 1 2 9276
Entity #12: Chains: K,S - NADH-quinone oxidoreductase subunit 11 protein, length: 95 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 18878
95% 1 2 16258
90% 1 2 15848
70% 1 2 14722
50% 1 2 12898
40% 1 2 11575
30% 2 3 7054
Entity #13: Chains: L,T - NADH-quinone oxidoreductase subunit 12 protein, length: 606 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 12910
95% 1 2 12126
90% 1 2 11925
70% 1 2 11283
50% 1 2 10134
40% 2 3 6884
30% 2 4 5633
Entity #14: Chains: M,U - NADH-quinone oxidoreductase subunit 13 protein, length: 469 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 13409
95% 1 2 12432
90% 1 2 12220
70% 1 2 11532
50% 1 2 10319
40% 1 2 9393
30% 2 3 6171
Entity #15: Chains: N,V - NADH-quinone oxidoreductase subunit 14 protein, length: 427 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 13711
95% 1 2 12634
90% 1 2 12414
70% 1 2 11704
50% 1 2 10435
40% 1 2 9485
30% 2 3 6193
Entity #16: Chains: H,Q - NADH-quinone oxidoreductase subunit 8 protein, length: 365 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 14303
95% 1 2 13012
90% 1 2 12782
70% 1 2 12028
50% 1 2 10686
40% 1 2 9677
30% 1 2 8435
Entity #2: Chains: 2,C - NADH-quinone oxidoreductase subunit 2 protein, length: 181 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2298
95% 1 7 2909
90% 1 7 2950
70% 1 7 2955
50% 1 7 2922
40% 1 7 2855
30% 1 7 2657
Entity #3: Chains: 3,D - NADH-quinone oxidoreductase subunit 3 protein, length: 783 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2238
95% 1 7 2829
90% 1 7 2865
70% 1 7 2872
50% 1 7 2836
40% 1 7 2775
30% 1 7 2583
Entity #4: Chains: 4,E - NADH-quinone oxidoreductase subunit 4 protein, length: 409 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2250
95% 1 7 2847
90% 1 7 2883
70% 1 7 2889
50% 1 7 2856
40% 1 8 2616
30% 1 8 2443
Entity #5: Chains: 5,F - NADH-quinone oxidoreductase subunit 5 protein, length: 207 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2290
95% 1 7 2901
90% 1 7 2942
70% 1 7 2947
50% 1 7 2917
40% 1 7 2849
30% 1 7 2649
Entity #6: Chains: 6,G - NADH-quinone oxidoreductase subunit 6 protein, length: 181 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2299
95% 1 7 2910
90% 1 7 2951
70% 1 7 2956
50% 1 7 2923
40% 1 7 2856
30% 1 7 2658
Entity #7: Chains: 9,O - NADH-quinone oxidoreductase subunit 9 protein, length: 182 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2296
95% 1 7 2908
90% 1 7 2949
70% 1 7 2954
50% 1 7 2921
40% 1 7 2854
30% 1 7 2656
Entity #8: Chains: 7,I - NADH-quinone oxidoreductase subunit 15 protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2319
95% 1 7 2926
90% 1 7 2968
70% 1 7 2976
50% 1 7 2941
40% 1 7 2869
30% 1 7 2672
Entity #9: Chains: W,X - Putative uncharacterized protein TTHA1528 protein, length: 131 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 18156
95% 3 3 15754
90% 3 3 15368
70% 3 3 14310
50% 3 3 12536
40% 3 3 11234
30% 3 3 9666
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.