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An Information Portal to 111749 Biological Macromolecular Structures

Crystal structure of the entire respiratory complex I from Thermus thermophilus
Sequence Clustering and Redundancy Reduction Results
4HEA
Sequence Clusters for the Sequence Entities in PDB 4HEA
Entity #1: Chains: 1,B - NADH-quinone oxidoreductase subunit 1 protein, length: 438 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2347
95% 1 7 2980
90% 1 7 3025
70% 1 7 3013
50% 1 7 2936
40% 1 7 2864
30% 1 7 2676
Entity #10: Chains: A,P - NADH-quinone oxidoreductase subunit 7 protein, length: 119 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 19073
95% 1 2 16478
90% 1 2 16045
70% 1 2 14882
50% 1 2 13030
40% 1 2 11686
30% 1 2 10054
Entity #11: Chains: J,R - NADH-quinone oxidoreductase subunit 10 protein, length: 176 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 17823
95% 1 2 15577
90% 1 2 15179
70% 1 2 14122
50% 1 2 12380
40% 1 2 11088
30% 1 2 9536
Entity #12: Chains: K,S - NADH-quinone oxidoreductase subunit 11 protein, length: 95 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 19486
95% 1 2 16785
90% 1 2 16336
70% 1 2 15132
50% 1 2 13249
40% 1 2 11889
30% 2 3 7231
Entity #13: Chains: L,T - NADH-quinone oxidoreductase subunit 12 protein, length: 606 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 13347
95% 1 2 12524
90% 1 2 12297
70% 1 2 11597
50% 1 2 10405
40% 2 3 7071
30% 2 4 5782
Entity #14: Chains: M,U - NADH-quinone oxidoreductase subunit 13 protein, length: 469 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 13863
95% 1 2 12843
90% 1 2 12605
70% 1 2 11856
50% 1 2 10597
40% 1 2 9648
30% 2 3 6334
Entity #15: Chains: N,V - NADH-quinone oxidoreductase subunit 14 protein, length: 427 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 14180
95% 1 2 13058
90% 1 2 12812
70% 1 2 12041
50% 1 2 10727
40% 1 2 9753
30% 2 3 6356
Entity #16: Chains: H,Q - NADH-quinone oxidoreductase subunit 8 protein, length: 365 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 14781
95% 1 2 13446
90% 1 2 13189
70% 1 2 12373
50% 1 2 10984
40% 1 2 9953
30% 1 2 8666
Entity #2: Chains: 2,C - NADH-quinone oxidoreductase subunit 2 protein, length: 181 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2400
95% 1 7 3045
90% 1 7 3090
70% 1 7 3078
50% 1 7 3001
40% 1 7 2922
30% 1 7 2732
Entity #3: Chains: 3,D - NADH-quinone oxidoreductase subunit 3 protein, length: 783 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2338
95% 1 7 2967
90% 1 7 3012
70% 1 7 2997
50% 1 7 2916
40% 1 7 2839
30% 1 7 2653
Entity #4: Chains: 4,E - NADH-quinone oxidoreductase subunit 4 protein, length: 409 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2350
95% 1 7 2985
90% 1 7 3030
70% 1 7 3016
50% 1 7 2939
40% 1 8 2674
30% 1 8 2507
Entity #5: Chains: 5,F - NADH-quinone oxidoreductase subunit 5 protein, length: 207 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2393
95% 1 7 3037
90% 1 7 3082
70% 1 7 3070
50% 1 7 2995
40% 1 7 2915
30% 1 7 2722
Entity #6: Chains: 6,G - NADH-quinone oxidoreductase subunit 6 protein, length: 181 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2401
95% 1 7 3046
90% 1 7 3091
70% 1 7 3079
50% 1 7 3002
40% 1 7 2923
30% 1 7 2733
Entity #7: Chains: 9,O - NADH-quinone oxidoreductase subunit 9 protein, length: 182 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2398
95% 1 7 3044
90% 1 7 3089
70% 1 7 3077
50% 1 7 3000
40% 1 7 2921
30% 1 7 2731
Entity #8: Chains: 7,I - NADH-quinone oxidoreductase subunit 15 protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 2421
95% 1 7 3061
90% 1 7 3105
70% 1 7 3098
50% 1 7 3018
40% 1 7 2935
30% 1 7 2746
Entity #9: Chains: W,X - Putative uncharacterized protein TTHA1528 protein, length: 131 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 18751
95% 3 3 16271
90% 3 3 15847
70% 3 3 14714
50% 3 3 12884
40% 3 3 11549
30% 3 3 9928
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.