Sequence Similarity Clusters for the Entities in PDB 4HEA

Entity #1 | Chains: 1,B
NADH-quinone oxidoreductase subunit 1 protein, length: 438 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2555
95 % 1 7 3234
90 % 1 7 3282
70 % 1 7 3251
50 % 1 7 3169
40 % 1 7 3075
30 % 1 7 2868
Entity #10 | Chains: A,P
NADH-quinone oxidoreductase subunit 7 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20740
95 % 1 2 17811
90 % 1 2 17341
70 % 1 2 16050
50 % 1 2 14016
40 % 1 2 12536
30 % 1 2 10765
Entity #11 | Chains: J,R
NADH-quinone oxidoreductase subunit 10 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 19388
95 % 1 2 16846
90 % 1 2 16416
70 % 1 2 15242
50 % 1 2 13326
40 % 1 2 11899
30 % 1 2 10216
Entity #12 | Chains: K,S
NADH-quinone oxidoreductase subunit 11 protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 21199
95 % 1 2 18146
90 % 1 2 17657
70 % 1 2 16321
50 % 1 2 14253
40 % 1 2 12758
30 % 2 3 7782
Entity #13 | Chains: L,T
NADH-quinone oxidoreductase subunit 12 protein, length: 606 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 14553
95 % 1 2 13610
90 % 1 2 13358
70 % 1 2 12579
50 % 1 2 11261
40 % 2 3 7654
30 % 2 4 6233
Entity #14 | Chains: M,U
NADH-quinone oxidoreductase subunit 13 protein, length: 469 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 15125
95 % 1 2 13950
90 % 1 2 13687
70 % 1 2 12854
50 % 1 2 11462
40 % 1 2 10407
30 % 2 3 6847
Entity #15 | Chains: N,V
NADH-quinone oxidoreductase subunit 14 protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 15457
95 % 1 2 14165
90 % 1 2 13893
70 % 1 2 13036
50 % 1 2 11586
40 % 1 2 10507
30 % 2 3 6868
Entity #16 | Chains: H,Q
NADH-quinone oxidoreductase subunit 8 protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 16112
95 % 1 2 14582
90 % 1 2 14295
70 % 1 2 13389
50 % 1 2 11859
40 % 1 2 10716
30 % 1 2 9305
Entity #2 | Chains: 2,C
NADH-quinone oxidoreductase subunit 2 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2613
95 % 1 7 3308
90 % 1 7 3357
70 % 1 7 3324
50 % 1 7 3248
40 % 1 7 3149
30 % 1 7 2938
Entity #3 | Chains: 3,D
NADH-quinone oxidoreductase subunit 3 protein, length: 783 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2546
95 % 1 7 3219
90 % 1 7 3267
70 % 1 7 3236
50 % 1 7 3147
40 % 1 7 3050
30 % 1 7 2845
Entity #4 | Chains: 4,E
NADH-quinone oxidoreductase subunit 4 protein, length: 409 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2557
95 % 1 7 3241
90 % 1 7 3289
70 % 1 7 3255
50 % 1 7 3173
40 % 1 8 2873
30 % 1 8 2689
Entity #5 | Chains: 5,F
NADH-quinone oxidoreductase subunit 5 protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2607
95 % 1 7 3298
90 % 1 7 3347
70 % 1 7 3315
50 % 1 7 3240
40 % 1 7 3140
30 % 1 7 2925
Entity #6 | Chains: 6,G
NADH-quinone oxidoreductase subunit 6 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2614
95 % 1 7 3309
90 % 1 7 3358
70 % 1 7 3325
50 % 1 7 3249
40 % 1 7 3150
30 % 1 7 2939
Entity #7 | Chains: 9,O
NADH-quinone oxidoreductase subunit 9 protein, length: 182 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2612
95 % 1 7 3306
90 % 1 7 3355
70 % 1 7 3322
50 % 1 7 3247
40 % 1 7 3148
30 % 1 7 2937
Entity #8 | Chains: 7,I
NADH-quinone oxidoreductase subunit 15 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2638
95 % 1 7 3326
90 % 1 7 3375
70 % 1 7 3348
50 % 1 7 3274
40 % 1 7 3169
30 % 1 7 2964
Entity #9 | Chains: W,X
Putative uncharacterized protein TTHA1528 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 20394
95 % 3 3 17584
90 % 3 3 17126
70 % 3 3 15870
50 % 3 3 13863
40 % 3 3 12389
30 % 3 3 10635

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.