Sequence Similarity Clusters for the Entities in PDB 4HD9

Entity #1 | Chains: A
Mucosal addressin cell adhesion molecule 1 protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15650
95 % 2 6 8427 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 2.4
PDBFlex
90 % 2 6 8360
70 % 2 6 7938
50 % 2 6 7034
40 % 2 6 6509
30 % 2 6 5687

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures