Sequence Similarity Clusters for the Entities in PDB 4HD8

Entity #1 | Chains: A
NAD-dependent protein deacetylase sirtuin-3, mitochondrial protein, length: 284 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 25 730
95 % 15 27 955 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.5
PDBFlex
90 % 15 27 992
70 % 15 27 1031
50 % 35 50 526
40 % 44 63 479
30 % 73 112 256
Entity #2 | Chains: F
Fluor-de-Lys peptide protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.