Sequence Similarity Clusters for the Entities in PDB 4HD8

Entity #1 | Chains: A
NAD-dependent protein deacetylase sirtuin-3, mitochondrial protein, length: 284 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 25 721
95 % 15 27 946 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.5
PDBFlex
90 % 15 27 981
70 % 15 27 1014
50 % 35 49 526
40 % 44 62 475
30 % 73 111 254
Entity #2 | Chains: F
Fluor-de-Lys peptide protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.