Sequence Similarity Clusters for the Entities in PDB 4HCR

Entity #1 | Chains: H,M
PF-547659 heavy chain protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37317
95 % 1 1 28688
90 % 1 1 27682
70 % 598 2096 1
50 % 1241 4337 1
40 % 1241 4337 1
30 % 1376 5109 1
Entity #2 | Chains: L,N
PF-547659 light chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38045
95 % 1 1 29109
90 % 168 640 3
70 % 491 1765 2
50 % 1242 4337 1
40 % 1242 4337 1
30 % 1377 5109 1
Entity #3 | Chains: A,B
Mucosal addressin cell adhesion molecule 1 protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 14416
95 % 4 6 7294
90 % 4 6 7251
70 % 4 6 7034
50 % 4 6 6514
40 % 4 6 6057
30 % 4 6 5408

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.