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An Information Portal to 106082 Biological Macromolecular Structures

Crystal structure of human MAdCAM-1 D1D2 complexed with Fab PF-547659
Sequence Clustering and Redundancy Reduction Results
4HCR
Sequence Clusters for the Sequence Entities in PDB 4HCR
Entity #1: Chains: H,M - PF-547659 heavy chain protein, length: 229 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 30398
95% 1 1 23541
90% 1 1 22788
70% 431 1528 2
50% 887 3170 1
40% 888 3171 1
30% 977 3753 1
Entity #2: Chains: L,N - PF-547659 light chain protein, length: 219 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 31019
95% 1 1 23901
90% 13 42 548
70% 363 1332 3
50% 888 3170 1
40% 889 3171 1
30% 978 3753 1
Entity #3: Chains: A,B - Mucosal addressin cell adhesion molecule 1 protein, length: 209 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 4 11577
95% 4 6 5955
90% 4 6 5941
70% 4 6 5817
50% 4 6 5428
40% 4 6 5063
30% 4 6 4563
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.