Sequence Similarity Clusters for the Entities in PDB 4HCR

Entity #1 | Chains: H,M
PF-547659 heavy chain protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 33595
95 % 1 1 25875
90 % 1 1 24987
70 % 504 1790 1
50 % 1037 3692 1
40 % 1038 3693 1
30 % 1143 4355 1
Entity #2 | Chains: L,N
PF-547659 light chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 34263
95 % 1 1 26265
90 % 20 57 398
70 % 417 1526 3
50 % 1038 3692 1
40 % 1039 3693 1
30 % 1144 4355 1
Entity #3 | Chains: A,B
Mucosal addressin cell adhesion molecule 1 protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 12848
95 % 4 6 6564
90 % 4 6 6532
70 % 4 6 6359
50 % 4 6 5914
40 % 4 6 5513
30 % 4 6 4943

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.