Sequence Similarity Clusters for the Entities in PDB 4HCB

Entity #1 | Chains: A,B
Exodeoxyribonuclease I protein, length: 481 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 17918
95 % 5 12 3541 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.0
PDBFlex
90 % 5 12 3603
70 % 5 12 3564
50 % 5 12 3465
40 % 5 12 3352
30 % 5 12 3152
Entity #2 | Chains: C,D
DNA (5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures