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DNA binding by GATA transcription factor-complex 1
Sequence Clustering and Redundancy Reduction Results
4HCA
Sequence Clusters for the Sequence Entities in PDB 4HCA
Entity #1: Chains: A - Trans-acting T-cell-specific transcription factor GATA-3 protein, length: 115 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 18733
95% 3 3 16159
90% 3 3 15760
70% 5 5 8032
50% 5 5 7329
40% 5 5 6764
30% 5 5 6018
Entity #2: Chains: X - DNA (5'-D(*AP*AP*TP*GP*TP*CP*CP*AP*TP*CP*TP*GP*AP*TP*AP*AP*GP*AP*CP*G)-3') dna, length: 20 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: Y - DNA (5'-D(*TP*TP*CP*GP*TP*CP*TP*TP*AP*TP*CP*AP*GP*AP*TP*GP*GP*AP*CP*A)-3') dna, length: 20 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.