Sequence Similarity Clusters for the Entities in PDB 4HC1

Entity #1 | Chains: A,B
Mucosal addressin cell adhesion molecule 1 protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 21219
95 % 6 6 7721
90 % 6 6 7673
70 % 6 6 7445
50 % 6 6 6862
40 % 6 6 6375
30 % 6 6 5693
Entity #2 | Chains: H,M
10G3 heavy chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39733
95 % 1 1 30412
90 % 1 1 29254
70 % 1488 2238 2
50 % 3079 4619 1
40 % 3079 4619 1
30 % 3609 5440 1
Entity #3 | Chains: L,N
10G3 light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40355
95 % 1 1 30764
90 % 28 30 1111
70 % 1518 2280 1
50 % 3080 4619 1
40 % 3080 4619 1
30 % 3610 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.