Sequence Similarity Clusters for the Entities in PDB 4HC1

Entity #1 | Chains: A,B
Mucosal addressin cell adhesion molecule 1 protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21531
95 % 6 6 7839 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 2.6
PDBFlex
90 % 6 6 7784
70 % 6 6 7551
50 % 6 6 6954
40 % 6 6 6462
30 % 6 6 5767
Entity #2 | Chains: H,M
10G3 heavy chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40303
95 % 1 1 30844
90 % 1 1 29667
70 % 1515 2282 2
50 % 3142 4717 1
40 % 3142 4717 1
30 % 3695 5571 1
Entity #3 | Chains: L,N
10G3 light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40930
95 % 1 1 31197 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 28 30 1129
70 % 1550 2329 1
50 % 3143 4717 1
40 % 3143 4717 1
30 % 3696 5571 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.