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An Information Portal to 108263 Biological Macromolecular Structures

Crystal structure of a loop deleted mutant of human MAdCAM-1 D1D2 complexed with Fab 10G3
Sequence Clustering and Redundancy Reduction Results
4HC1
Sequence Clusters for the Sequence Entities in PDB 4HC1
Entity #1: Chains: A,B - Mucosal addressin cell adhesion molecule 1 protein, length: 206 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 16693
95% 6 6 6089
90% 6 6 6067
70% 6 6 5930
50% 6 6 5524
40% 6 6 5152
30% 6 6 4627
Entity #2: Chains: H,M - 10G3 heavy chain protein, length: 220 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 31583
95% 1 1 24320
90% 1 1 23490
70% 1090 1564 2
50% 2263 3242 1
40% 2264 3243 1
30% 2622 3827 1
Entity #3: Chains: L,N - 10G3 light chain protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 32094
95% 1 1 24609
90% 25 26 1077
70% 954 1361 3
50% 2264 3242 1
40% 2265 3243 1
30% 2623 3827 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.