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An Information Portal to 109093 Biological Macromolecular Structures

Crystal structure of a loop deleted mutant of human MAdCAM-1 D1D2 complexed with Fab 10G3
Sequence Clustering and Redundancy Reduction Results
4HC1
Sequence Clusters for the Sequence Entities in PDB 4HC1
Entity #1: Chains: A,B - Mucosal addressin cell adhesion molecule 1 protein, length: 206 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 16817
95% 6 6 6131
90% 6 6 6107
70% 6 6 5970
50% 6 6 5560
40% 6 6 5188
30% 6 6 4660
Entity #2: Chains: H,M - 10G3 heavy chain protein, length: 220 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 31821
95% 1 1 24506
90% 1 1 23666
70% 1095 1590 2
50% 2274 3295 1
40% 2275 3296 1
30% 2635 3893 1
Entity #3: Chains: L,N - 10G3 light chain protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 32340
95% 1 1 24798
90% 25 26 1087
70% 960 1388 3
50% 2275 3295 1
40% 2276 3296 1
30% 2636 3893 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.