Sequence Similarity Clusters for the Entities in PDB 4HB4

Entity #1 | Chains: A
GTP-binding nuclear protein Ran protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 55 505
95 % 21 74 333 Flexibility: Medium
Max RMSD: 15.6, Avg RMSD: 4.8
PDBFlex
90 % 21 78 337
70 % 22 81 371
50 % 22 81 436
40 % 23 82 460
30 % 355 834 13
Entity #2 | Chains: B
Ran-specific GTPase-activating protein 1 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 5815
95 % 11 31 1897 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 11 31 1938
70 % 11 31 1953
50 % 11 32 1856
40 % 11 32 1836
30 % 11 32 1778
Entity #3 | Chains: C
Exportin-1 protein, length: 1023 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63566
95 % 12 36 1502
90 % 12 36 1527
70 % 12 36 1539
50 % 12 47 1138
40 % 12 47 1132
30 % 12 47 1127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3GJ0 1 A, B GTP-binding nuclear protein Ran 9606
2 4HAT 1 A GTP-binding nuclear protein Ran 9606
3 4WVF 1 A GTP-binding nuclear protein Ran 9606
4 5CIQ 1 A, B GTP-binding nuclear protein Ran 9606
5 4HB2 1 A GTP-binding nuclear protein Ran 9606
6 3GJ3 1 A GTP-binding nuclear protein Ran 9606
7 3GJ8 1 A, C GTP-binding nuclear protein Ran 9606
8 1I2M 1 A, C GTP-BINDING NUCLEAR PROTEIN RAN 9606
9 5CJ2 1 A, B, C, D, E, F, G, H GTP-binding nuclear protein Ran 9606
10 5CIW 1 A, B GTP-binding nuclear protein Ran 9606
11 4HAW 1 A GTP-binding nuclear protein Ran 9606
12 4HAZ 1 A GTP-binding nuclear protein Ran 9606
13 3GJ5 1 A, C GTP-binding nuclear protein Ran 9606
14 5CIT 1 A, B GTP-binding nuclear protein Ran 9606
15 4HAU 1 A GTP-binding nuclear protein Ran 9606
16 3GJ7 1 A, C GTP-binding nuclear protein Ran 9606
17 4HAV 1 A GTP-binding nuclear protein Ran 9606
18 4GMX 1 A GTP-binding nuclear protein Ran 9606
19 3M1I 1 A GTP-binding nuclear protein GSP1/CNR1 4932
20 5UWP 1 A GTP-binding nuclear protein Ran 9606
21 5DIF 1 A GTP-binding nuclear protein Ran 9606
22 4HB4 1 A GTP-binding nuclear protein Ran 9606
23 3RAN 1 A, B, C, D PROTEIN (GTP-BINDING NUCLEAR PROTEIN RAN) Q69L MUTANT CONSTRUCTED BY PROTEIN ENGINEERING 9612 3.5.1.2 | Details
24 1BYU 1 A, B PROTEIN (GTP-BINDING PROTEIN RAN) ALL 9612 3.5.1.2 | Details
25 3WYG 1 A Gsp1p UNP residues 1-182 4932
26 4GPT 1 A GTP-binding nuclear protein Ran 9606
27 5UWI 1 A GTP-binding nuclear protein Ran 9606
28 5UWW 1 A GTP-binding nuclear protein Ran 9606
29 3CH5 1 A GTP-binding nuclear protein Ran 9606
30 3WYF 1 A, D Gsp1p 4932
31 5UWJ 1 A GTP-binding nuclear protein Ran 9606
32 5DI9 1 A GTP-binding nuclear protein Ran 9606
33 4HB0 1 A GTP-binding nuclear protein Ran 9606
34 1WA5 1 A GTP-BINDING NUCLEAR PROTEIN RAN RESIDUES 1-176 9612 3.5.1.2 | Details
35 4HAX 2 A GTP-binding nuclear protein Ran 9606
36 5UWU 1 A GTP-binding nuclear protein Ran 9606
37 5XOJ 1 A GTP-binding nuclear protein UNP residues 1-182 4932
38 5UWH 1 A GTP-binding nuclear protein Ran 9606
39 5DHF 1 A GTP-binding nuclear protein Ran 9606
40 5UWR 1 A GTP-binding nuclear protein Ran 9606
41 3GJ4 1 A, C GTP-binding nuclear protein Ran 9606
42 5UWQ 1 A GTP-binding nuclear protein Ran 9606
43 4HAY 1 A GTP-binding nuclear protein Ran 9606
44 5UWT 1 A GTP-binding nuclear protein Ran 9606
45 5UWO 1 A GTP-binding nuclear protein Ran 9606
46 5UWS 1 A GTP-binding nuclear protein Ran 9606
47 1QG2 1 A PROTEIN (RAN) ALL 9612 3.5.1.2 | Details
48 1QG4 1 A, B PROTEIN (RAN) ALL 9612 3.5.1.2 | Details
49 5BXQ 2 C, D, E GTP-binding nuclear protein Ran 9612 3.5.1.2 | Details
50 3EA5 1 A, C GTP-binding nuclear protein Ran 9606
51 5DH9 1 A GTP-binding nuclear protein Ran 9606
52 5JLJ 1 A GTP-binding nuclear protein Ran 9606
53 1IBR 1 A, C GTP-binding nuclear protein RAN 9606
54 1A2K 2 C, D, E RAN 9612 3.5.1.2 | Details
55 5CLL 1 A, C GTP-binding nuclear protein Ran 9606
56 3GJ6 1 A GTP-binding nuclear protein Ran 9606
57 5DHA 1 A GTP-binding nuclear protein Ran 9606
58 3GJX 2 C, F GTP-binding nuclear protein Ran 9606
59 2BKU 1 A, C GTP-BINDING NUCLEAR PROTEIN RAN RESIDUES 1-177 9612 3.5.1.2 | Details
60 5DIS 2 B GTP-binding nuclear protein Ran UNP residues 8-179 9606
61 1K5D 1 A, D, G, J GTP-binding nuclear protein RAN 9606
62 3NBZ 3 C, F GTP-binding nuclear protein Ran 9606
63 2X19 1 A GTP-BINDING NUCLEAR PROTEIN GSP1/CNR1 RESIDUES 8-179 4932
64 4OL0 1 A GTP-binding nuclear protein Ran 9606
65 4HB3 1 A GTP-binding nuclear protein Ran 9606
66 3W3Z 2 B GTP-binding nuclear protein Ran UNP residues 1-176 9612 3.5.1.2 | Details
67 3NC0 3 C, F GTP-binding nuclear protein Ran 9606
68 3A6P 3 C, H GTP-binding nuclear protein Ran 9612 3.5.1.2 | Details
69 5DLQ 2 C, D GTP-binding nuclear protein Ran 9606
70 5CLQ 1 A, C GTP-binding nuclear protein Ran 9606
71 1RRP 1 A, C RAN 9606
72 3NC1 1 C GTP-binding nuclear protein Ran 9606
73 1K5G 1 A, D, G, J GTP-binding nuclear protein RAN 9606
74 3ICQ 2 B, C GTP-binding nuclear protein GSP1/CNR1 Ran, UNP residues 9-179 4932
75 1QBK 2 C RAN FULL-LENGTH PROTEIN 9606
76 3NBY 2 C, F GTP-binding nuclear protein Ran 9606
77 4C0Q 2 C, D GTP-BINDING NUCLEAR PROTEIN RAN 9606
78 3ZJY 1 A, D, F GTP-BINDING NUCLEAR PROTEIN RAN RESIDUES 1-180 9606
79 2N1B 1 A GTP-binding nuclear protein Ran 9606
80 2MMG 1 A GTP-binding nuclear protein Ran 9606
81 2MMC 1 A GTP-binding nuclear protein Ran 9606