Sequence Similarity Clusters for the Entities in PDB 4HB4

Entity #1 | Chains: A
GTP-binding nuclear protein Ran protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 51 460
95 % 21 74 294
90 % 21 77 298
70 % 22 80 322
50 % 22 80 380
40 % 23 81 402
30 % 311 749 16
Entity #2 | Chains: B
Ran-specific GTPase-activating protein 1 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 11 5497
95 % 11 31 1709
90 % 11 31 1745
70 % 11 31 1782
50 % 11 32 1692
40 % 11 32 1709
30 % 11 32 1653
Entity #3 | Chains: C
Exportin-1 protein, length: 1023 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47674
95 % 11 33 1491
90 % 11 33 1517
70 % 11 33 1550
50 % 11 33 1594
40 % 12 46 1053
30 % 12 46 1030

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.