Sequence Similarity Clusters for the Entities in PDB 4HB4

Entity #1 | Chains: A
GTP-binding nuclear protein Ran protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 39 450
95 % 20 61 298
90 % 20 64 304
70 % 21 66 316
50 % 21 66 339
40 % 22 67 361
30 % 295 688 13
Entity #2 | Chains: B
Ran-specific GTPase-activating protein 1 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 11 4766
95 % 10 19 2769
90 % 10 19 2813
70 % 10 19 2811
50 % 10 20 2465
40 % 10 20 2453
30 % 10 20 2297
Entity #3 | Chains: C
Exportin-1 protein, length: 1023 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42438
95 % 10 21 2205
90 % 10 21 2245
70 % 10 21 2253
50 % 10 21 2263
40 % 11 34 1213
30 % 11 34 1187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.